RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 MMP27Q9H306 513 aa7.72□□□□□ -1.17
PRKCH-208ENST00000553846 POLE3Q9NRF9 147 aa7.72□□□□□ -1.17
PRKCH-208ENST00000553846 RCE1Q9Y256 329 aa7.72□□□□□ -1.17
PRKCH-208ENST00000553846 DNAJC15Q9Y5T4 150 aa7.72□□□□□ -1.17
PRKCH-208ENST00000553846 IGLV3-9A0A075B6K5 115 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 VSTM5A8MXK1 200 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 C1QCP02747 245 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 PROCP04070 461 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 GPIP06744 558 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 NAT2P11245 290 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 FPR2P25090 351 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 HPCAL1P37235 193 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 KRTAP10-3P60369 221 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 NAA20P61599 178 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 KCNJ10P78508 379 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 NPRL3Q12980 569 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 SLC9A3R2Q15599 337 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 OR7A5Q15622 319 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 UGT3A2Q3SY77 523 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 AVPI1Q5T686 147 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 KANK2Q63ZY3 851 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 NIPAL3Q6P499 406 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 HMGN2P46Q86SG4 172 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 ZNF584Q8IVC4 421 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 TMEM123Q8N131 208 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 ARFGAP2Q8N6H7 521 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 KRTCAP2Q8N6L1 136 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 ZNF563Q8TA94 476 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 RAB39BQ96DA2 213 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 PTDSS2Q9BVG9 487 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 C7orf69Q9H7B7 122 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 CRLF2Q9HC73 371 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 GPR35Q9HC97 309 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 OXSMQ9NWU1 459 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 PLEK2Q9NYT0 353 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 GIMAP2Q9UG22 337 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 POLR3KQ9Y2Y1 108 aaPredicted RBP7.71□□□□□ -1.18
PRKCH-208ENST00000553846 WIPI2Q9Y4P8 454 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 CACNG2Q9Y698 323 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 DNAH9Q9NYC9 4486 aa7.71□□□□□ -1.18
PRKCH-208ENST00000553846 DUXAA6NLW8 204 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 POC1B-GALNT4F8VUJ3 575 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 SCN2BO60939 215 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 SKAP2O75563 359 aaPredicted RBP7.7□□□□□ -1.18
PRKCH-208ENST00000553846 SEC14L2O76054 403 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 VAMP5O95183 116 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 HLA-HP01893 362 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 GSTA1P08263 222 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 LINC00032P0C843 101 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 MATN1P21941 496 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 CRYBB2P43320 205 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 RELBQ01201 579 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 SLC7A5Q01650 507 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 MVKQ03426 396 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 EPS8Q12929 822 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 FAM153CQ494X1 144 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 ZNF311Q5JNZ3 666 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 PHYHD1Q5SRE7 291 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 SAXO2Q658L1 398 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 NHLRC1Q6VVB1 395 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 C9orf139Q6ZV77 190 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 C6orf120Q7Z4R8 191 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 GPAT4Q86UL3 456 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 WDFY1Q8IWB7 410 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 CCDC36Q8IYA8 594 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 TSPAN32Q96QS1 320 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 RSPO3Q9BXY4 272 aaPredicted RBP7.7□□□□□ -1.18
PRKCH-208ENST00000553846 OR51I1Q9H343 314 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 NKIRAS2Q9NYR9 191 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 LEF1Q9UJU2 399 aaPredicted RBP7.7□□□□□ -1.18
PRKCH-208ENST00000553846 NUP50Q9UKX7 468 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 FZR1Q9UM11 496 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 WDR45Q9Y484 360 aa7.7□□□□□ -1.18
PRKCH-208ENST00000553846 RNF103-CHMP3A0A140T963 221 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 AGAP5A6NIR3 686 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 C17orf100A8MU93 164 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 ZNF99A8MXY4 864 aaPredicted RBP7.69□□□□□ -1.18
PRKCH-208ENST00000553846 TMEM233B4DJY2 109 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 AZIN1O14977 448 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 CDC14BO60729 498 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 KRT33AO76009 404 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 ALX3O95076 343 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 RPL3P39023 403 aaKnown RBP7.69□□□□□ -1.18
PRKCH-208ENST00000553846 ACAA2P42765 397 aaKnown RBP7.69□□□□□ -1.18
PRKCH-208ENST00000553846 CEACAM16Q2WEN9 425 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 LSM12Q3MHD2 195 aaKnown RBP7.69□□□□□ -1.18
PRKCH-208ENST00000553846 MMEL1Q495T6 779 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 SPDYE7PQ495Y7 208 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 TMEM255AQ5JRV8 349 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 KPRPQ5T749 579 aaPredicted RBP7.69□□□□□ -1.18
PRKCH-208ENST00000553846 ASPHD2Q6ICH7 369 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 Q6ZPA2 131 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 CMIPQ8IY22 773 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 CLECL1Q8IZS7 167 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 NATD1Q8N6N6 113 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 KIF18AQ8NI77 898 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 ACMSDQ8TDX5 336 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 GTF3AQ92664 365 aaKnown RBP7.69□□□□□ -1.18
PRKCH-208ENST00000553846 POP5Q969H6 163 aaKnown RBP7.69□□□□□ -1.18
PRKCH-208ENST00000553846 TMIGD2Q96BF3 282 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms