RNA–Protein interactions for RNA: ENST00000553710.1

KTN1-211, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-211ENST00000553710 HAS2Q92819 552 aa0.26□□□□□ -2.37
KTN1-211ENST00000553710 FGF11Q92914 225 aa0.26□□□□□ -2.37
KTN1-211ENST00000553710 GLYATL1Q969I3 302 aa0.26□□□□□ -2.37
KTN1-211ENST00000553710 DCPSQ96C86 337 aaKnown RBP0.26□□□□□ -2.37
KTN1-211ENST00000553710 CHIAQ9BZP6 476 aa0.26□□□□□ -2.37
KTN1-211ENST00000553710 CALHM2Q9HA72 323 aa0.26□□□□□ -2.37
KTN1-211ENST00000553710 PLGRKTQ9HBL7 147 aa0.26□□□□□ -2.37
KTN1-211ENST00000553710 TMEM9BQ9NQ34 198 aa0.26□□□□□ -2.37
KTN1-211ENST00000553710 PFDN4Q9NQP4 134 aa0.26□□□□□ -2.37
KTN1-211ENST00000553710 RBM28Q9NW13 759 aaKnown RBP0.26□□□□□ -2.37
KTN1-211ENST00000553710 FOXA2Q9Y261 457 aaPredicted RBP0.26□□□□□ -2.37
KTN1-211ENST00000553710 CCL27Q9Y4X3 112 aa0.26□□□□□ -2.37
KTN1-211ENST00000553710 SPAG9O60271 1321 aaKnown RBP0.26□□□□□ -2.37
KTN1-211ENST00000553710 CDHR2Q9BYE9 1310 aa0.26□□□□□ -2.37
KTN1-211ENST00000553710 RPAP1Q9BWH6 1393 aaPredicted RBP0.26□□□□□ -2.37
KTN1-211ENST00000553710 EDC4Q6P2E9 1401 aaKnown RBP0.26□□□□□ -2.37
KTN1-211ENST00000553710 CCDC141Q6ZP82 1450 aa0.26□□□□□ -2.37
KTN1-211ENST00000553710 THADAQ6YHU6 1953 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
KTN1-211ENST00000553710 NAIPQ13075 1403 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 SAGE2PA6NJ88 616 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 ZNF705GA8MUZ8 300 aaPredicted RBP0.25□□□□□ -2.37
KTN1-211ENST00000553710 VGLL3A8MV65 326 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 TLR4O00206 839 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 AKAP3O75969 853 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 VAMP5O95183 116 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 CHRNGP07510 517 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 HMGB1P09429 215 aaKnown RBP0.25□□□□□ -2.37
KTN1-211ENST00000553710 HLA-EP13747 358 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 PGAM1P18669 254 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 WARSP23381 471 aaKnown RBP0.25□□□□□ -2.37
KTN1-211ENST00000553710 PTAFRP25105 342 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 RDXP35241 583 aaKnown RBP0.25□□□□□ -2.37
KTN1-211ENST00000553710 FRKP42685 505 aaPredicted RBP0.25□□□□□ -2.37
KTN1-211ENST00000553710 PPP5CP53041 499 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 CRYBB1P53674 252 aaPredicted RBP0.25□□□□□ -2.37
KTN1-211ENST00000553710 CLDN6P56747 220 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 KRTAP10-4P60372 401 aaPredicted RBP0.25□□□□□ -2.37
KTN1-211ENST00000553710 VLDLRP98155 873 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 ZNF154Q13106 437 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 PPP2R5CQ13362 524 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 ZNF621Q6ZSS3 439 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 TOM1L2Q6ZVM7 507 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 SPATA19Q7Z5L4 167 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 ASPGQ86U10 573 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 AQP12AQ8IXF9 295 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 PGAM4Q8N0Y7 254 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 RPP25LQ8N5L8 163 aaKnown RBP0.25□□□□□ -2.37
KTN1-211ENST00000553710 VN1R2Q8NFZ6 395 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 RGP1Q92546 391 aaPredicted RBP0.25□□□□□ -2.37
KTN1-211ENST00000553710 VPS33AQ96AX1 596 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 MRPL53Q96EL3 112 aaKnown RBP0.25□□□□□ -2.37
KTN1-211ENST00000553710 FER1L6-AS2Q96M78 137 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 ACCSQ96QU6 501 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 TAAR1Q96RJ0 339 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 KCNA7Q96RP8 456 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 TSPAN18Q96SJ8 248 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 NTMT1Q9BV86 223 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 CDC42EP4Q9H3Q1 356 aaKnown RBP0.25□□□□□ -2.37
KTN1-211ENST00000553710 MCCC2Q9HCC0 563 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 C5AR2Q9P296 337 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 ZNF629Q9UEG4 869 aaPredicted RBP0.25□□□□□ -2.37
KTN1-211ENST00000553710 OR12D3Q9UGF7 316 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 UGT2A1Q9Y4X1 527 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 MAB21L2Q9Y586 359 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 MALRD1Q5VYJ5 2156 aa0.25□□□□□ -2.37
KTN1-211ENST00000553710 KIAA1671Q9BY89 1806 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 ZNF236Q9UL36 1845 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 UBR2Q8IWV8 1755 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 KIF27Q86VH2 1401 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 ROBO3Q96MS0 1386 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 USP42Q9H9J4 1324 aaKnown RBP0.24□□□□□ -2.37
KTN1-211ENST00000553710 CCL15-CCL14A0A0B4J2E2 113 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 A8MUU9 505 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 TPD52L2O43399 206 aaKnown RBP0.24□□□□□ -2.37
KTN1-211ENST00000553710 EIF5BO60841 1220 aaKnown RBP0.24□□□□□ -2.37
KTN1-211ENST00000553710 TNFSF13O75888 250 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 TCN2P20062 427 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 IL11P20809 199 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 TGFBR1P36897 503 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 NPY4RP50391 375 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 LIM2P55344 173 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 RND3P61587 244 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 NRF1Q16656 503 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 CCL15Q16663 113 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 KRTAP21-1Q3LI58 79 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 CFAP58Q5T655 872 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 LIPKQ5VXJ0 399 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 ZFAND6Q6FIF0 208 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 ARCQ7LC44 396 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 FAM86B1Q8N7N1 296 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 SYT14Q8NB59 555 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 NPBQ8NG41 125 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 RAB7BQ96AH8 199 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 C14orf79Q96F83 325 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 TGS1Q96RS0 853 aaKnown RBP0.24□□□□□ -2.37
KTN1-211ENST00000553710 SRXN1Q9BYN0 137 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 OR11A1Q9GZK7 315 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 POMKQ9H5K3 350 aa0.24□□□□□ -2.37
KTN1-211ENST00000553710 SRD5A3Q9H8P0 318 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms