RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 ACTBP60709 375 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 RAB4BP61018 213 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 ACTA2P62736 377 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 RPS6P62753 249 aaKnown RBP3.15□□□□□ -1.91
TDP1-207ENST00000553617 ACTG1P63261 375 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 ACTG2P63267 376 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 ACTC1P68032 377 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 ACTA1P68133 377 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 PAX5Q02548 391 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 ZFP36L1Q07352 338 aaKnown RBP3.15□□□□□ -1.91
TDP1-207ENST00000553617 NAB1Q13506 487 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 RAB35Q15286 201 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 SIX1Q15475 284 aaPredicted RBP3.15□□□□□ -1.91
TDP1-207ENST00000553617 GOLGA7BQ2TAP0 167 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 MS4A18Q3C1V0 323 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 FAM74A3Q4VXF1 159 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 C2CD6Q53TS8 623 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 COQ5Q5HYK3 327 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 ACER2Q5QJU3 275 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 FAM71F2Q6NXP2 309 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 KCNIP4Q6PIL6 250 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 TMEM107Q6UX40 140 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 HSDL2Q6YN16 418 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 PLEKHG7Q6ZR37 379 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 USP43Q70EL4 1123 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 CYS1Q717R9 158 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 SSX9Q7RTT3 188 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 TRIM69Q86WT6 500 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 TMEM17Q86X19 198 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 Q8NBF4 154 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 SUMF1Q8NBK3 374 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 M1APQ8TC57 530 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 HTR3CQ8WXA8 447 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 ST8SIA1Q92185 356 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 GTF3AQ92664 365 aaKnown RBP3.15□□□□□ -1.91
TDP1-207ENST00000553617 NRGNQ92686 78 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 GTF2H4Q92759 462 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 CCDC127Q96BQ5 260 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 RAB3CQ96E17 227 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 MOCOSQ96EN8 888 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 DNAJA3Q96EY1 480 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 SH3YL1Q96HL8 342 aaPredicted RBP3.15□□□□□ -1.91
TDP1-207ENST00000553617 AMDHD1Q96NU7 426 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 TGM7Q96PF1 710 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 DUX3Q96PT4 197 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 TGS1Q96RS0 853 aaKnown RBP3.15□□□□□ -1.91
TDP1-207ENST00000553617 CTRCQ99895 268 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 TRIM9Q9C026 710 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 POLR3FQ9H1D9 316 aaPredicted RBP3.15□□□□□ -1.91
TDP1-207ENST00000553617 LRRN3Q9H3W5 708 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 SP140LQ9H930 580 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 DYRK4Q9NR20 520 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 BATF3Q9NR55 127 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 PTTG3PQ9NZH4 202 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 ADA2Q9NZK5 511 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 GNG12Q9UBI6 72 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 C3orf18Q9UK00 162 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 PROCRQ9UNN8 238 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 FLVCR2Q9UPI3 526 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 NEURL4Q96JN8 1562 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 GRIN2DO15399 1336 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 A0A087WYN8 130 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 TRBV7-9A0A0J9YWB2 115 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 SMCO3A2RU48 225 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 E5RI56 91 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 PRSS44E7EML9 344 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 EDIL3O43854 480 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 PFKFB2O60825 505 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 OR2F2O95006 317 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 SNAPINO95295 136 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 SEMA4FO95754 770 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 NUDT14O95848 222 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 TSPAN12O95859 305 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 OCMP0CE72 109 aaPredicted RBP3.14□□□□□ -1.91
TDP1-207ENST00000553617 CCNE1P24864 410 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 LAP3P28838 519 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 CRABP2P29373 138 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 OTX1P32242 354 aaPredicted RBP3.14□□□□□ -1.91
TDP1-207ENST00000553617 P2RY2P41231 377 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 MAGEA5P43359 124 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 EMDP50402 254 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 CSRP3P50461 194 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 MFAP2P55001 183 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 ATP5J2P56134 94 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 VSNL1P62760 191 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 RPL10AP62906 217 aaKnown RBP3.14□□□□□ -1.91
TDP1-207ENST00000553617 CHRNB3Q05901 458 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 TSPAN31Q12999 210 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 PEX6Q13608 980 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 PDK2Q15119 407 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 NECTIN1Q15223 517 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 VAMP3Q15836 100 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 PSG3Q16557 428 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 MICBQ29980 383 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 C17orf58Q2M2W7 97 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 GGTA1PQ4G0N0 100 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 KHDRBS2Q5VWX1 349 aaKnown RBP3.14□□□□□ -1.91
TDP1-207ENST00000553617 FAM219BQ5XKK7 198 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 TMEM225Q6GV28 225 aa3.14□□□□□ -1.91
TDP1-207ENST00000553617 SPOPLQ6IQ16 392 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms