RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 NPEPL1Q8NDH3 523 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 DNAAF1Q8NEP3 725 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 OR4D9Q8NGE8 314 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 OR6N1Q8NGY5 312 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 ZNF417Q8TAU3 575 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 PHOSPHO2Q8TCD6 241 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 GPR148Q8TDV2 347 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 SCARB1Q8WTV0 552 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 SMAP2Q8WU79 429 aaPredicted RBP4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 SNX33Q8WV41 574 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 LCN9Q8WX39 176 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 ING5Q8WYH8 240 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 PNPLA2Q96AD5 504 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 NACC2Q96BF6 587 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 ORAI1Q96D31 301 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 SGTBQ96EQ0 304 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 S100A16Q96FQ6 103 aaKnown RBP4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 ART5Q96L15 291 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 ZFP3Q96NJ6 502 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 TBX5Q99593 518 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 GFI1Q99684 422 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 NRTNQ99748 197 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 ZFYVE21Q9BQ24 234 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 G6PC3Q9BUM1 346 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 DNTTIP1Q9H147 329 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 OR51V1Q9H2C8 321 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 IGFLR1Q9H665 355 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 C6orf106Q9H6K1 298 aaPredicted RBP4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 METTL17Q9H7H0 456 aaPredicted RBP4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 AUNIPQ9H7T9 357 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 EXOSC3Q9NQT5 275 aaKnown RBP4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 ANKRD10Q9NXR5 420 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 TAS2R10Q9NYW0 307 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 FLRT3Q9NZU0 649 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 MGAT4CQ9UBM8 478 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 FOXJ3Q9UPW0 622 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 RCE1Q9Y256 329 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 KCNK6Q9Y257 313 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 HIF3AQ9Y2N7 669 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 ZNF337Q9Y3M9 751 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 NINQ8N4C6 2090 aa4.81□□□□□ -1.64
TMEM55B-204ENST00000553602 TRAV27A0A087WT01 109 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 A0A0A6YYH2 397 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 UBE2QL1A1L167 161 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 OTOL1A6NHN0 477 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 A6NJ64 397 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 TMEM212A6NML5 194 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 MCRIP1C9JLW8 97 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 H7C417 338 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 J3QW42 95 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 L7N2F9 121 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SULT1C2O00338 296 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 PEX12O00623 359 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 PIN1P1O15428 100 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 P2RX6O15547 441 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 TPD52L2O43399 206 aaKnown RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 XRCC3O43542 346 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 FGF17O60258 216 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 GMDSO60547 372 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 KHDRBS3O75525 346 aaKnown RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 RP2O75695 350 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 GLSO94925 669 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 KAT7O95251 611 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 APBB3O95704 486 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 CBX7O95931 251 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 HPXP02790 462 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 HIST1H2ABP04908 130 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 NGFRP08138 427 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 NMBP08949 121 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 MRPL3P09001 348 aaKnown RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 HOXD4P09016 255 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 FGF2P09038 288 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 CSF1P09603 554 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 ACSM4P0C7M7 580 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 GKN3PP0CG01 181 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 CLUP10909 449 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 CD37P11049 281 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 PNMTP11086 282 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 PPP3CBP16298 524 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 HIST1H1CP16403 213 aaKnown RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SPI1P17947 270 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 ATF4P18848 351 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 FUT1P19526 365 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 CSRP1P21291 193 aaKnown RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 PRKACBP22694 351 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 NFYAP23511 347 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 S100A11P31949 105 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 CSF2RBP32927 897 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 GALNSP34059 522 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 PTGER1P34995 402 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 TNFRSF4P43489 277 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 VEGFCP49767 419 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SELENOPP49908 381 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 P2RX1P51575 399 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 CAPZA1P52907 286 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 ART1P52961 327 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SLC16A1P53985 500 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 VSX2P58304 361 aaPredicted RBP4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 TAS2R20P59543 309 aa4.8□□□□□ -1.64
TMEM55B-204ENST00000553602 SKP1P63208 163 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms