RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 GCNT6Q5T4J0 391 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 FBXW9Q5XUX1 488 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 PAQR6Q6TCH4 344 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 DPP10Q8N608 796 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 ZNF433Q8N7K0 673 aaPredicted RBP10.34□□□□□ -0.75
SRP54-203ENST00000553544 TSPEARQ8WU66 669 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 C3orf49Q96BT1 292 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 THOC1Q96FV9 657 aaKnown RBP10.34□□□□□ -0.75
SRP54-203ENST00000553544 NAA11Q9BSU3 229 aaPredicted RBP10.34□□□□□ -0.75
SRP54-203ENST00000553544 TMEM38AQ9H6F2 299 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 ARMC7Q9H6L4 198 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 NOSIPQ9Y314 301 aaKnown RBP10.34□□□□□ -0.75
SRP54-203ENST00000553544 ATP23Q9Y6H3 246 aa10.34□□□□□ -0.75
SRP54-203ENST00000553544 LIPT2A6NK58 231 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 CCT8L1PA6NM43 557 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 A8MVM7 634 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 VWC2LB2RUY7 222 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 TMEM229AB2RXF0 380 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 PDLIM1O00151 329 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 ANGPT2O15123 496 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 GPIP06744 558 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 NCF2P19878 526 aaPredicted RBP10.33□□□□□ -0.76
SRP54-203ENST00000553544 PRKAR1BP31321 381 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 P2RY4P51582 365 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 COPZ1P61923 177 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 CDK6Q00534 326 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 GUCY1A3Q02108 690 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 BNIP2Q12982 314 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 CEACAM7Q14002 265 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 IQCCQ4KMZ1 466 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 RUNDC3AQ59EK9 446 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 REEP3Q6NUK4 255 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 RETREG3Q86VR2 466 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 MEX3DQ86XN8 651 aaKnown RBP10.33□□□□□ -0.76
SRP54-203ENST00000553544 UBE2J2Q8N2K1 259 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 CADM2Q8N3J6 435 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 TMEM99Q8N816 258 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 LSMEM1Q8N8F7 131 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 ZIC4Q8N9L1 334 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 ZNF540Q8NDQ6 660 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 OR52N5Q8NH56 324 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 NFKBIDQ8NI38 313 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 FOXN4Q96NZ1 517 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 CPPED1Q9BRF8 314 aaPredicted RBP10.33□□□□□ -0.76
SRP54-203ENST00000553544 PIMREGQ9BSJ6 248 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 PRR14Q9BWN1 585 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 FKRPQ9H9S5 495 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 FGFR1OP2Q9NVK5 253 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 KLHL14Q9P2G3 628 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 MALT1Q9UDY8 824 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 LEF1Q9UJU2 399 aaPredicted RBP10.33□□□□□ -0.76
SRP54-203ENST00000553544 FLVCR1Q9Y5Y0 555 aa10.33□□□□□ -0.76
SRP54-203ENST00000553544 TENM1Q9UKZ4 2725 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 LOC390937A0A1W2PQ73 354 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 AQP7P3A6NL99 342 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 EVPLLA8MZ36 301 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 C5orf58C9J3I9 102 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 M0R1B8 84 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 SLC22A2O15244 555 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 FRS3O43559 492 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 TPST1O60507 370 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 FZD7O75084 574 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 MRPL33O75394 65 aaKnown RBP10.32□□□□□ -0.76
SRP54-203ENST00000553544 LY6HO94772 140 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 AKR7A3O95154 331 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 HOXC5Q00444 222 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 EGR4Q05215 589 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 CR1LQ2VPA4 569 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 GLIPR1L2Q4G1C9 344 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 OR7E24Q6IFN5 339 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 DHRS4L2Q6PKH6 230 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 C6orf89Q6UWU4 347 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 COMTD1Q86VU5 262 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 STK35Q8TDR2 534 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 TMEM45BQ96B21 275 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 APH1AQ96BI3 265 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 C1orf159Q96HA4 380 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 ANKRD27Q96NW4 1050 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 SF3B5Q9BWJ5 86 aaKnown RBP10.32□□□□□ -0.76
SRP54-203ENST00000553544 TMEM120AQ9BXJ8 343 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 PIF1Q9H611 641 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 C12orf10Q9HB07 376 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 SLC9A8Q9Y2E8 581 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 NDUFAF1Q9Y375 327 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 SLC25A15Q9Y619 301 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 FKBP7Q9Y680 259 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 MEGF8Q7Z7M0 2845 aa10.32□□□□□ -0.76
SRP54-203ENST00000553544 MGAM2Q2M2H8 2515 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 FTCDNL1E5RQL4 147 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 RAD51DO75771 328 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 IGHV3-9P01782 118 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 SRP14P37108 136 aaKnown RBP10.31□□□□□ -0.76
SRP54-203ENST00000553544 FOXG1P55316 489 aaPredicted RBP10.31□□□□□ -0.76
SRP54-203ENST00000553544 PCBP3P57721 371 aaKnown RBP10.31□□□□□ -0.76
SRP54-203ENST00000553544 SPOCK1Q08629 439 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 SCARB2Q14108 478 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 OR7A5Q15622 319 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 CARTPTQ16568 116 aa10.31□□□□□ -0.76
SRP54-203ENST00000553544 OTUD3Q5T2D3 398 aaPredicted RBP10.31□□□□□ -0.76
SRP54-203ENST00000553544 C1orf140Q5VVS0 124 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms