RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 KIR2DL5BA0A0G2JN68 375 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 KIR2DL5BA0A0G2JPC4 375 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 RBMY1BA6NDE4 496 aaKnown RBP3.54□□□□□ -1.84
SYNE2-210ENST00000553455 RBMY1EA6NEQ0 496 aaKnown RBP3.54□□□□□ -1.84
SYNE2-210ENST00000553455 USP27XA6NNY8 438 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 A8MU10 97 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 TOM1O60784 492 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 UPK3AO75631 287 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 OR7A10O76100 309 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 ACTL6AO96019 429 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 MMP1P03956 469 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 HPNP05981 417 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 RBMY1DP0C7P1 496 aaKnown RBP3.54□□□□□ -1.84
SYNE2-210ENST00000553455 DNAH10OSP0CZ25 163 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 RBMY1A1P0DJD3 496 aaKnown RBP3.54□□□□□ -1.84
SYNE2-210ENST00000553455 CD1BP29016 333 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 SSR1P43307 286 aaKnown RBP3.54□□□□□ -1.84
SYNE2-210ENST00000553455 VDAC2P45880 294 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-210ENST00000553455 GYG1P46976 350 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 MRPL28Q13084 256 aaKnown RBP3.54□□□□□ -1.84
SYNE2-210ENST00000553455 DAZ2Q13117 558 aaKnown RBP3.54□□□□□ -1.84
SYNE2-210ENST00000553455 GNMTQ14749 295 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 NSDHLQ15738 373 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 MARCH8Q5T0T0 291 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 UTS2BQ765I0 119 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 TAS2R42Q7RTR8 314 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 ZNF546Q86UE3 836 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 FAM228AQ86W67 206 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 KIR2DL5AQ8N109 375 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 NECAB1Q8N987 351 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 OR9G1Q8NH87 305 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 KIR2DL5BQ8NHK3 375 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 TPD52L3Q96J77 140 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 PLEKHA8Q96JA3 519 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 SLC25A22Q9H936 323 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 LY9Q9HBG7 655 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 PDFQ9HBH1 243 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 DAZ3Q9NR90 486 aaKnown RBP3.54□□□□□ -1.84
SYNE2-210ENST00000553455 QPCTLQ9NXS2 382 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 PISDQ9UG56 409 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 ARHGAP23Q9P227 1491 aa3.54□□□□□ -1.84
SYNE2-210ENST00000553455 ZNF716A6NP11 495 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 A8MUA0 341 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 ABCD4O14678 606 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 AGPAT2O15120 278 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 TRAF3IP2O43734 574 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-210ENST00000553455 ZNF861PO60384 105 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 TMEM50AO95807 157 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 IGLV1-47P01700 117 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 P04436 131 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 CT62P0C5K7 136 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 ZNF735P0CB33 412 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 DUX4L4P0CJ87 422 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 TBPP20226 339 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 HTR1EP28566 365 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 CRYBB2P43320 205 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 NUP107P57740 925 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 TAS2R19P59542 299 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 PSG7Q13046 419 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 ARFRP1Q13795 201 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 ATP6AP1Q15904 470 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 CTRB2Q6GPI1 263 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 LRRC31Q6UY01 552 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 RALGPS2Q86X27 583 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-210ENST00000553455 OR6C4Q8NGE1 309 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 ARPC1AQ92747 370 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 FGF14Q92915 247 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 ZIM3Q96PE6 472 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 ETNK2Q9NVF9 386 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 CLCF1Q9UBD9 225 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 MMP17Q9ULZ9 603 aa3.53□□□□□ -1.84
SYNE2-210ENST00000553455 TDRD6O60522 2096 aaKnown RBP3.53□□□□□ -1.84
SYNE2-210ENST00000553455 PANO1I0J062 215 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 NDUFB10O96000 172 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 CST1P01037 141 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 CHTF8P0CG12 524 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 BTCP35070 178 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 CTRLP40313 264 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 VHLP40337 213 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 GLP1RP43220 463 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 YAP1P46937 504 aaKnown RBP3.52□□□□□ -1.85
SYNE2-210ENST00000553455 NOVP48745 357 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 ARRB1P49407 418 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-210ENST00000553455 SUCLG1P53597 346 aaKnown RBP3.52□□□□□ -1.85
SYNE2-210ENST00000553455 ATP5IP56385 69 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-210ENST00000553455 PLP1P60201 277 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 PRPS1P60891 318 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 ACVR1Q04771 509 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 BST2Q10589 180 aaKnown RBP3.52□□□□□ -1.85
SYNE2-210ENST00000553455 KDM7AQ6ZMT4 941 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 ZNF620Q6ZNG0 422 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 RNF165Q6ZSG1 346 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 SLC25A48Q6ZT89 311 aaKnown RBP3.52□□□□□ -1.85
SYNE2-210ENST00000553455 PNKDQ8N490 385 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 OR4F6Q8NGB9 312 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 PYROXD1Q8WU10 500 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 FAM151AQ8WW52 585 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 ACOT11Q8WXI4 607 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-210ENST00000553455 UCN3Q969E3 161 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 FCRL1Q96LA6 429 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms