RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 CRYBA2P53672 197 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 LIPEQ05469 1076 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 GABRA6Q16445 453 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 DEFB113Q30KQ7 82 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 CYBRD1Q53TN4 286 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 NCMAPQ5T1S8 102 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 C8orf82Q6P1X6 216 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-204ENST00000553324 ZNF704Q6ZNC4 412 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-204ENST00000553324 CARM1Q86X55 608 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 TREML1Q86YW5 311 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 RBM45Q8IUH3 476 aaKnown RBP13.51□□□□□ -0.25
SHMT2-204ENST00000553324 C10orf53Q8N6V4 93 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 ANKK1Q8NFD2 765 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 OR4D11Q8NGI4 311 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 ZNF417Q8TAU3 575 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 SLC41A3Q96GZ6 507 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 RADILQ96JH8 1075 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 HS3ST6Q96QI5 342 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 ZNF587Q96SQ5 575 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-204ENST00000553324 TMEM204Q9BSN7 226 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 LINC00470Q9BZP3 86 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 ALG2Q9H553 416 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 MRPL39Q9NYK5 338 aaKnown RBP13.51□□□□□ -0.25
SHMT2-204ENST00000553324 SLC7A7Q9UM01 511 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 ARL2BPQ9Y2Y0 163 aa13.51□□□□□ -0.25
SHMT2-204ENST00000553324 ANKRD17O75179 2603 aaKnown RBP13.51□□□□□ -0.25
SHMT2-204ENST00000553324 ZNF587BE7ETH6 402 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 GSTA4O15217 222 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 TMCC2O75069 709 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 RAD51DO75771 328 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 BGLAPP02818 100 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 THRBP10828 461 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 CD53P19397 219 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 HOXC12P31275 282 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 SLC7A2P52569 658 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 GYS2P54840 703 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 TAS2R41P59536 307 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 IL1RL1Q01638 556 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 PMS2P3Q13401 168 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 LRRC23Q53EV4 343 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-204ENST00000553324 ADAM5Q6NVV9 412 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 NIPAL3Q6P499 406 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 KLHL17Q6TDP4 642 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 PIGWQ7Z7B1 504 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 P3H2Q8IVL5 708 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 UEVLDQ8IX04 471 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 KDM8Q8N371 416 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 BOD1Q96IK1 185 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 LRRC37BQ96QE4 947 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 AMBRA1Q9C0C7 1298 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 UBTD1Q9HAC8 227 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 RNF115Q9Y4L5 304 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 NOX1Q9Y5S8 564 aa13.5□□□□□ -0.25
SHMT2-204ENST00000553324 MAGED1Q9Y5V3 778 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-204ENST00000553324 HTR3EA5X5Y0 456 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 SLC43A1O75387 559 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 GMNNO75496 209 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 DCTN3O75935 186 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 OR5F1O95221 314 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 OR6A2O95222 327 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 HIST1H2ABP04908 130 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 ITGA5P08648 1049 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 CBLP22681 906 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 RBM34P42696 430 aaKnown RBP13.49□□□□□ -0.25
SHMT2-204ENST00000553324 SELENOPP49908 381 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 CLDN17P56750 224 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 PUDPQ08623 228 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 TMEM108Q6UXF1 575 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 HIST3H2AQ7L7L0 130 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 PXKQ7Z7A4 578 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 PIK3C3Q8NEB9 887 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 OR5J2Q8NH18 312 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 HIST1H2ACQ93077 130 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 TPD52L3Q96J77 140 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 HS6ST2Q96MM7 605 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 ZNF426Q9BUY5 554 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 FKRPQ9H9S5 495 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 MOV10Q9HCE1 1003 aaKnown RBP13.49□□□□□ -0.25
SHMT2-204ENST00000553324 SPAG4Q9NPE6 437 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 OBP2BQ9NPH6 170 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 NANSQ9NR45 359 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 B3GAT1Q9P2W7 334 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 USP22Q9UPT9 525 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 MGAT4BQ9UQ53 548 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 AMDHD2Q9Y303 409 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 SLC25A15Q9Y619 301 aa13.49□□□□□ -0.25
SHMT2-204ENST00000553324 MS4A18H0YCH9 400 aa13.48□□□□□ -0.25
SHMT2-204ENST00000553324 CXCR6O00574 342 aa13.48□□□□□ -0.25
SHMT2-204ENST00000553324 PLPP3O14495 311 aa13.48□□□□□ -0.25
SHMT2-204ENST00000553324 HS3ST1O14792 307 aa13.48□□□□□ -0.25
SHMT2-204ENST00000553324 WNT11O96014 354 aa13.48□□□□□ -0.25
SHMT2-204ENST00000553324 IGF2P01344 180 aa13.48□□□□□ -0.25
SHMT2-204ENST00000553324 THY1P04216 161 aa13.48□□□□□ -0.25
SHMT2-204ENST00000553324 HOXB1P14653 301 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-204ENST00000553324 PTAFRP25105 342 aa13.48□□□□□ -0.25
SHMT2-204ENST00000553324 SH3BGRP55822 239 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-204ENST00000553324 PRPS1P60891 318 aa13.48□□□□□ -0.25
SHMT2-204ENST00000553324 PSME3P61289 254 aa13.48□□□□□ -0.25
SHMT2-204ENST00000553324 LTBQ06643 244 aa13.48□□□□□ -0.25
SHMT2-204ENST00000553324 MS4A18Q3C1V0 323 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms