RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 MEGF8Q7Z7M0 2845 aa7.82□□□□□ -1.16
SYNE2-209ENST00000553308 LOC105371242A0A075B767 164 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 PRSS51A0A1B0GVH4 220 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 A8MVM7 634 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 RPL36A-HNRNPH2H7BZ11 118 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 M0R233 179 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 SYNGR3O43761 229 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 NCR1O76036 304 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 VAMP5O95183 116 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 AVPP01185 164 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 TFP02787 698 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 GAAP10253 952 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 PNMTP11086 282 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 HOXB1P14653 301 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-209ENST00000553308 IL7RP16871 459 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 NR4A1P22736 598 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 ARR3P36575 388 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 ACAA2P42765 397 aaKnown RBP7.81□□□□□ -1.16
SYNE2-209ENST00000553308 ALDH3B1P43353 468 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 CAPZA2P47755 286 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 ARFIP2P53365 341 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 POU3F1Q03052 451 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-209ENST00000553308 SCGB2A2Q13296 93 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 CASP8Q14790 479 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 MAD2L1BPQ15013 274 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-209ENST00000553308 PDCD2Q16342 344 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-209ENST00000553308 GSTA3Q16772 222 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 CEACAM16Q2WEN9 425 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 AWAT1Q58HT5 328 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 SPANXN4Q5MJ08 99 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 C1orf140Q5VVS0 124 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 FAHD2BQ6P2I3 314 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF836Q6ZNA1 936 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 LRRC74BQ6ZQY2 392 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 VRK2Q86Y07 508 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 OR51F2Q8NH61 342 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 KIF18AQ8NI77 898 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 YIPF5Q969M3 257 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 FAHD2AQ96GK7 314 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 MS4A3Q96HJ5 214 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 SYT3Q9BQG1 590 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 DPY30Q9C005 99 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 GPR35Q9HC97 309 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF275Q9NSD4 429 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-209ENST00000553308 MYEF2Q9P2K5 600 aaKnown RBP7.81□□□□□ -1.16
SYNE2-209ENST00000553308 REV1Q9UBZ9 1251 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 SEC14L4Q9UDX3 406 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 RCE1Q9Y256 329 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 RASD1Q9Y272 281 aa7.81□□□□□ -1.16
SYNE2-209ENST00000553308 CDHR4A6H8M9 788 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 FTCDNL1E5RQL4 147 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 TMPRSS2O15393 492 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 NPIPB7O75200 414 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 SLC43A1O75387 559 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 SPAG7O75391 227 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF432O94892 652 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 AHSA1O95433 338 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 PNPP00491 289 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 HLA-HP01893 362 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 DBIP07108 87 aaKnown RBP7.8□□□□□ -1.16
SYNE2-209ENST00000553308 NR2F1P10589 423 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 PRG2P13727 222 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 CREB1P16220 341 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 ACHEP22303 614 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 SERPINB5P36952 375 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 SEC24CP53992 1094 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 LMO4P61968 165 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 GNA13Q14344 377 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 MAPK11Q15759 364 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 SLC9B1Q4ZJI4 515 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 COX20Q5RI15 118 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 PRR31Q5SQ13 230 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 PHYHD1Q5SRE7 291 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 ANXA8L1Q5VT79 327 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 ATG16L1Q676U5 607 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 WBP2NLQ6ICG8 309 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 USP43Q70EL4 1123 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 LRP11Q86VZ4 500 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 PEX5LQ8IYB4 626 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF440Q8IYI8 595 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 GPR137CQ8N3F9 429 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 VPS37AQ8NEZ2 397 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 PNPT1Q8TCS8 783 aaKnown RBP7.8□□□□□ -1.16
SYNE2-209ENST00000553308 RDH5Q92781 318 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 TESCQ96BS2 214 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 SLC25A36Q96CQ1 311 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 SLC6A7Q99884 636 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 PTDSS2Q9BVG9 487 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 AKTIPQ9H8T0 292 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 MTHFD2LQ9H903 347 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-209ENST00000553308 PPCSQ9HAB8 311 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 ESM1Q9NQ30 184 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 G6PC2Q9NQR9 355 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 B3GAT1Q9P2W7 334 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 FZR1Q9UM11 496 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 PCDHGB1Q9Y5G3 927 aa7.8□□□□□ -1.16
SYNE2-209ENST00000553308 TRAV20A0A0B4J274 112 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 TLDC2A0PJX2 215 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 E9PBE3 544 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 PPIHO43447 177 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms