RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ZNF295-AS1Q8N0V1 137 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 TMEM255BQ8WV15 326 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 TMEM239Q8WW34 195 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 HS6ST2Q96MM7 605 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 DACH2Q96NX9 599 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 OXGR1Q96P68 337 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 FNDC11Q9BVV2 318 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 ANKRD19PQ9H560 264 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 MEPEQ9NQ76 525 aaPredicted RBP10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 MAN2C1Q9NTJ4 1040 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 TAS2R1Q9NYW7 299 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 NDRG3Q9UGV2 375 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 ZNF229Q9UJW7 825 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 RCE1Q9Y256 329 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 ENPP4Q9Y6X5 453 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 RAI1Q7Z5J4 1906 aaPredicted RBP10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 TEX15Q9BXT5 2789 aa10.37□□□□□ -0.75
TRAFD1-209ENST00000552896 ALPK2Q86TB3 2170 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 HTR3EA5X5Y0 456 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 ENO4A6NNW6 628 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 J3KTA2 159 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 FFAR1O14842 300 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 TRAF3IP2O43734 574 aaPredicted RBP10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 AKAP8O43823 692 aaKnown RBP10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 PDE5AO76074 875 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 EPXP11678 715 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 PRF1P14222 555 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 NQO1P15559 274 aaKnown RBP10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 ZNF43P17038 809 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 ATP6V1B2P21281 511 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 EDNRAP25101 427 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 MSX2P35548 267 aaPredicted RBP10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 VLDLRP98155 873 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 LTBQ06643 244 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 PUDPQ08623 228 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 PMS2P3Q13401 168 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 TRAM2Q15035 370 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 FBXW9Q5XUX1 488 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 LCN8Q6JVE9 175 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 CREB3L2Q70SY1 520 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 SLC46A3Q7Z3Q1 461 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 CXorf67Q86X51 503 aaPredicted RBP10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 EPHX4Q8IUS5 362 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 C10orf53Q8N6V4 93 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 ZIC4Q8N9L1 334 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 OR5J2Q8NH18 312 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 POP5Q969H6 163 aaKnown RBP10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 ZNF775Q96BV0 537 aaPredicted RBP10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 ASB9Q96DX5 294 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 C7orf34Q96L11 122 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 ZNF385AQ96PM9 386 aaKnown RBP10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 HDHD5Q9BXW7 423 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 NANSQ9NR45 359 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 PLA2G2EQ9NZK7 142 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 NDUFAF4Q9P032 175 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 PRSS50Q9UI38 385 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 GPR52Q9Y2T5 361 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 MED31Q9Y3C7 131 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 V9GYQ6 96 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 NOTCH2Q04721 2471 aa10.36□□□□□ -0.75
TRAFD1-209ENST00000552896 A0A1W2PRQ8 180 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 OR6C65A6NJZ3 312 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 LRRN3E7EW58 273 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 PLPP3O14495 311 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 GYG2O15488 501 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 CH25HO95992 272 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 ASAH2BP0C7U1 165 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 ITGA2P17301 1181 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 RHCEP18577 417 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 CBLP22681 906 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 NTF4P34130 210 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 YAP1P46937 504 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 TLE4Q04727 773 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 BNIP1Q12981 228 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 ITGADQ13349 1161 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 DGCR6Q14129 220 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 TRIM25Q14258 630 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 DAZAP2Q15038 168 aaPredicted RBP10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 SFRP5Q5T4F7 317 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 AAED1Q7RTV5 226 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 NANOGNBQ7Z5D8 188 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 TSEN54Q7Z6J9 526 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 UEVLDQ8IX04 471 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 POMGNT2Q8NAT1 580 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 PIK3C3Q8NEB9 887 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 STEAP2Q8NFT2 490 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 PFN4Q8NHR9 129 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 LINC01560Q8TB33 94 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 LIPHQ8WWY8 451 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 ACOT11Q8WXI4 607 aaPredicted RBP10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 KISS1RQ969F8 398 aaPredicted RBP10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 CCDC124Q96CT7 223 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 SLC7A6OSQ96CW6 309 aaPredicted RBP10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 PYURFQ96I23 114 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 DHRS1Q96LJ7 313 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 USB1Q9BQ65 265 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 MED18Q9BUE0 208 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 ACTR6Q9GZN1 396 aa10.35□□□□□ -0.75
TRAFD1-209ENST00000552896 SLCO5A1Q9H2Y9 848 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms