RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 KCNS2Q9ULS6 477 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 CHST2Q9Y4C5 530 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 TRRAPQ9Y4A5 3859 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 TMEM129A0AVI4 362 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 LIPT2A6NK58 231 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 ANKRD28O15084 1053 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 SHOXO15266 292 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 KCNAB3O43448 404 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 TMCC2O75069 709 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 KRT33AO76009 404 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 HSPA4LO95757 839 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 ETFAP13804 333 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 UQCRC2P22695 453 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 ACAA2P42765 397 aaKnown RBP5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 P2RY4P51582 365 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 POLR2HP52434 150 aaKnown RBP5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC16A1P53985 500 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 SEC24CP53992 1094 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 CLDN17P56750 224 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 PRPS1P60891 318 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 VSNL1P62760 191 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC35A1P78382 337 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 ARF1P84077 181 aaKnown RBP5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 EMX2Q04743 252 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 PIGFQ07326 219 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 EPS8Q12929 822 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 CASP8Q14790 479 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 MAD2L1BPQ15013 274 aaPredicted RBP5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 ANKRD16Q6P6B7 361 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 ZNF621Q6ZSS3 439 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 SPATA21Q7Z572 469 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 SERPINA11Q86U17 422 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 P2RY8Q86VZ1 359 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 LRP11Q86VZ4 500 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 EPHX4Q8IUS5 362 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 NUDCD3Q8IVD9 361 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 OR1K1Q8NGR3 316 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 TMEM234Q8WY98 164 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 GTF3AQ92664 365 aaKnown RBP5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 BCL2L2Q92843 193 aaPredicted RBP5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 ZHX1-C8orf76Q96EF9 292 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC38A2Q96QD8 506 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 SORT1Q99523 831 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 PRPF18Q99633 342 aaKnown RBP5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 PIMREGQ9BSJ6 248 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 PLA2G12AQ9BZM1 189 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 OR51B6Q9H340 312 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 FKRPQ9H9S5 495 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 CA10Q9NS85 328 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 EXD2Q9NVH0 621 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 MYEF2Q9P2K5 600 aaKnown RBP5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 MID2Q9UJV3 735 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 MGAT4BQ9UQ53 548 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 PMF1-BGLAPU3KQ54 211 aa5.92□□□□□ -1.46
PRPF40B-214ENST00000551320 ARHGAP32A7KAX9 2087 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 PRSS51A0A1B0GVH4 220 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 CFAP73A6NFT4 308 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 CCDC154A6NI56 674 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 AGAP5A6NIR3 686 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 OR6C65A6NJZ3 312 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 FAM157AC9JC47 383 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 LRRN3E7EW58 273 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 H3BQF6 201 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 hCG_2039718K7EN88 272 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 RNASET2O00584 256 aaKnown RBP5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 GPR171O14626 319 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 TYROBPO43914 113 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 ZNF500O60304 480 aaPredicted RBP5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 SERPINI2O75830 405 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 STAMBPO95630 424 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 HPRP00739 348 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 HLA-HP01893 362 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 KRT16P08779 473 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 ADRA2AP08913 450 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 NR2F1P10589 423 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 KITP10721 976 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 HLA-DOBP13765 273 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 DAOP14920 347 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 ZNF23P17027 643 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 CXCR1P25024 350 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 COL8A2P25067 703 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 APEX1P27695 318 aaKnown RBP5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 MPGP29372 298 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 S100A3P33764 101 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 SRP14P37108 136 aaKnown RBP5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 RPL3P39023 403 aaKnown RBP5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 ETV4P43268 484 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 ALDH3B1P43353 468 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 RPS5P46782 204 aaKnown RBP5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 CAPZA2P47755 286 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 GZMKP49863 264 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 KHKP50053 298 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 DSCR9P59020 149 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 SNRPD2P62316 118 aaKnown RBP5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 IL1RL1Q01638 556 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 ROR2Q01974 943 aaKnown RBP5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 NAAAQ02083 359 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 CHRNB3Q05901 458 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 RUNX1T1Q06455 604 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms