RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260		E9PQ18	207 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	SCD	O00767	359 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	GUCY1B2	O75343	617 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	SUPT3H	O75486	399 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	TSPAN9	O75954	239 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	KCNK2	O95069	426 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	WISP3	O95389	354 aa	Predicted RBP	4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	TPM3	P06753	285 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	NGFR	P08138	427 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	CD28	P10747	220 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	ACP2	P11117	423 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	MLN	P12872	115 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	HPGD	P15428	266 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	PGAM1	P18669	254 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	MAGEA3	P43357	314 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	MAGEA6	P43360	314 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	MAGEA8	P43361	318 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	IER3	P46695	156 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	P2RX1	P51575	399 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	OR2B6	P58173	313 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	CSNK2A1	P68400	391 aa	Predicted RBP	4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	GLO1	Q04760	184 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	BST1	Q10588	318 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	TBX2	Q13207	712 aa	Predicted RBP	4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	LARS2	Q15031	903 aa	Known RBP	4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	HFE	Q30201	348 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	SYT14P1	Q58G82	188 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	SLC25A53	Q5H9E4	307 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	CDKL4	Q5MAI5	379 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	MROH9	Q5TGP6	573 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	TMEM154	Q6P9G4	183 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	C4orf22	Q6V702	233 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	C1orf122	Q6ZSJ8	110 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	AAED1	Q7RTV5	226 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	PAGE2	Q7Z2X7	111 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	PEX26	Q7Z412	305 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	GALNT7	Q86SF2	657 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	ZC3HC1	Q86WB0	502 aa	Known RBP	4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	KLHDC1	Q8N7A1	406 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	UBL4B	Q8N7F7	174 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	ADAMTS15	Q8TE58	950 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	TRPC4AP	Q8TEL6	797 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	CERS2	Q96G23	380 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	C20orf173	Q96LM9	149 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	RHOXF2	Q9BQY4	288 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	FAIM2	Q9BWQ8	316 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	OR11A1	Q9GZK7	315 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	PATZ1	Q9HBE1	687 aa	Known RBP	4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	TMEM165	Q9HC07	324 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	HINT3	Q9NQE9	182 aa	Known RBP	4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	SLC35C2	Q9NQQ7	365 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	GIN1	Q9NXP7	522 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	GRID1	Q9ULK0	1009 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	SLC12A4	Q9UP95	1085 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260	SLC9A8	Q9Y2E8	581 aa		4.9	□□□□□ -1.63
RACGAP1-223	ENST00000551260		A0A087WV62	115 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260		A0A096LPK6	155 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260		A0A0U1RQK1	487 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260		A0A1W2PQD3	144 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260		A8MXK9	166 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	ZNF587B	E7ETH6	402 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	TNFRSF13B	O14836	293 aa	Predicted RBP	4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	ZNF500	O60304	480 aa	Predicted RBP	4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	MFAP3L	O75121	409 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	UPK3A	O75631	287 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	KRT33A	O76009	404 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	RSL1D1	O76021	490 aa	Known RBP	4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	TGDS	O95455	350 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	IGHV2-70	P01814	119 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	PPIAL4G	P0DN37	164 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	VSIG10L2	P0DP72	767 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	UROS	P10746	265 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	ZNF35	P13682	527 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	ZNF14	P17017	642 aa	Predicted RBP	4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	HOXA5	P20719	270 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	GLRX	P35754	106 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	MAP3K8	P41279	467 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	ETV4	P43268	484 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	SELENOP	P49908	381 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	CCR4	P51679	360 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	NCBP2	P52298	156 aa	Known RBP eCLIP	4.89	□□□□□ -1.63	3e-9	■■■□□ 17.9
RACGAP1-223	ENST00000551260	EFNB2	P52799	333 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	FGF12	P61328	243 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	ERVS71-1	P61550	626 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	GNB2	P62879	340 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	ARF1	P84077	181 aa	Known RBP	4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	EGFEM1P	Q0D2K5	195 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	MERTK	Q12866	999 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	SLC17A1	Q14916	467 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	CLEC6A	Q6EIG7	209 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	CAVIN1	Q6NZI2	390 aa	Known RBP	4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	GDPGP1	Q6ZNW5	385 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	GOLGA7	Q7Z5G4	137 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	MISP	Q8IVT2	679 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	OR2L13	Q8N349	312 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	C1orf52	Q8N6N3	182 aa	Known RBP	4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	L3MBTL4	Q8NA19	623 aa		4.89	□□□□□ -1.63
RACGAP1-223	ENST00000551260	POMGNT2	Q8NAT1	580 aa		4.89	□□□□□ -1.63

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