RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TRDNQ13061 729 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 CRMP1Q14194 572 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 C14orf28Q4W4Y0 310 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 DCST2Q5T1A1 773 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 AADACL4Q5VUY2 407 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 ZSCAN25Q6NSZ9 544 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 CCDC80Q76M96 950 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 FAM184AQ8NB25 1140 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 OR8K3Q8NH51 312 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 NANPQ8TBE9 248 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 TAF15Q92804 592 aaKnown RBP eCLIP4.3□□□□□ -1.72
CPSF6-206ENST00000550987 EMG1Q92979 244 aaKnown RBP4.3□□□□□ -1.72
CPSF6-206ENST00000550987 FBXO32Q969P5 355 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 C8orf76Q96K31 380 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 LINC00479Q96M42 142 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 SYT11Q9BT88 431 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 MCRIP2Q9BUT9 160 aaKnown RBP4.3□□□□□ -1.72
CPSF6-206ENST00000550987 GON7Q9BXV9 100 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 NXF5Q9H1B4 397 aaKnown RBP4.3□□□□□ -1.72
CPSF6-206ENST00000550987 CRLF2Q9HC73 371 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 ELOVL2Q9NXB9 296 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 RCOR3Q9P2K3 495 aaPredicted RBP4.3□□□□□ -1.72
CPSF6-206ENST00000550987 ANAPC7Q9UJX3 599 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 SPATA2Q9UM82 520 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 HELZP42694 1942 aaKnown RBP4.3□□□□□ -1.72
CPSF6-206ENST00000550987 F5P12259 2224 aa4.3□□□□□ -1.72
CPSF6-206ENST00000550987 MYO5AQ9Y4I1 1855 aaKnown RBP4.3□□□□□ -1.72
CPSF6-206ENST00000550987 A0A1B0GTH9 108 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 OR6C65A6NJZ3 312 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 RPL37AP8A6NKH3 93 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 TM9SF1O15321 606 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 POLR2DO15514 142 aaKnown RBP4.29□□□□□ -1.72
CPSF6-206ENST00000550987 LCMT2O60294 686 aaKnown RBP4.29□□□□□ -1.72
CPSF6-206ENST00000550987 TRIM3O75382 744 aaPredicted RBP4.29□□□□□ -1.72
CPSF6-206ENST00000550987 OPN1LWP04000 364 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 IGF1P05019 195 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 HSMCR30P0CW71 290 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 DBTP11182 482 aaKnown RBP4.29□□□□□ -1.72
CPSF6-206ENST00000550987 BCKDHAP12694 445 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 CPN1P15169 458 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 LMO2P25791 158 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 BDKRB1P46663 353 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 POU3F4P49335 361 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 CRIP2P52943 208 aaPredicted RBP4.29□□□□□ -1.72
CPSF6-206ENST00000550987 HILS1P60008 231 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 SNAP25P60880 206 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 EWSR1Q01844 656 aaKnown RBP eCLIP4.29□□□□□ -1.72
CPSF6-206ENST00000550987 ELAVL2Q12926 359 aaKnown RBP4.29□□□□□ -1.72
CPSF6-206ENST00000550987 ABRAXAS2Q15018 415 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 GGTA1PQ4G0N0 100 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 C2CD6Q53TS8 623 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 MS4A13Q5J8X5 152 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 MEDAGQ5VYS4 303 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 TMUB2Q71RG4 321 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 TAS2R42Q7RTR8 314 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 APTXQ7Z2E3 356 aaKnown RBP4.29□□□□□ -1.72
CPSF6-206ENST00000550987 NANOGNBQ7Z5D8 188 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 VSTM4Q8IW00 320 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 ZNF671Q8TAW3 534 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 RAPGEF5Q92565 580 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 SH3YL1Q96HL8 342 aaPredicted RBP4.29□□□□□ -1.72
CPSF6-206ENST00000550987 POM121L2Q96KW2 1035 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 C7orf34Q96L11 122 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 RPRD1AQ96P16 312 aaPredicted RBP4.29□□□□□ -1.72
CPSF6-206ENST00000550987 NPAS2Q99743 824 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 TMEM121Q9BTD3 319 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 TMEM43Q9BTV4 400 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 TUBB1Q9H4B7 451 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 EHD1Q9H4M9 534 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 NYAP2Q9P242 653 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 CYTH4Q9UIA0 394 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 RNF24Q9Y225 148 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 NAALAD2Q9Y3Q0 740 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 ALG6Q9Y672 507 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 FOCADQ5VW36 1801 aa4.29□□□□□ -1.72
CPSF6-206ENST00000550987 HERC1Q15751 4861 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 ZNF532Q9HCE3 1301 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 CROCCQ5TZA2 2017 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 SOCS3O14543 225 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 RNF113AO15541 343 aaKnown RBP4.28□□□□□ -1.72
CPSF6-206ENST00000550987 LRRTM2O43300 516 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 B3GAT3O94766 335 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 IGKV3-20P01619 116 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 S100A6P06703 90 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 WNT2P09544 360 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 PVRP15151 417 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 HSD17B2P37059 387 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 AP3M2P53677 418 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 ATP5IP56385 69 aaPredicted RBP4.28□□□□□ -1.72
CPSF6-206ENST00000550987 KRTAP10-9P60411 292 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 IRX1P78414 480 aaPredicted RBP4.28□□□□□ -1.72
CPSF6-206ENST00000550987 ZNF33BQ06732 778 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 SPAG1Q07617 926 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 LINC00242Q5T6M2 205 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 TTC19Q6DKK2 380 aaPredicted RBP4.28□□□□□ -1.72
CPSF6-206ENST00000550987 ACSM5Q6NUN0 579 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 IFNEQ86WN2 208 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 TMEM123Q8N131 208 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 BPIFB2Q8N4F0 458 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms