RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 TAC1P20366 129 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 EVI2BP34910 448 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 STARP49675 285 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 PDLIM4P50479 330 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 CLDN20P56880 219 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 ACSM2AQ08AH3 577 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 PLCXD2Q0VAA5 305 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 BST1Q10588 318 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 BIKQ13323 160 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 SLC10A1Q14973 349 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 TIGD6Q17RP2 521 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 NDUFAF6Q330K2 333 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 GRAMD1BQ3KR37 738 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 C1orf185Q5T7R7 199 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 RIPPLY2Q5TAB7 128 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 TMEM268Q5VZI3 342 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 AP1ARQ63HQ0 302 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 ACSM2BQ68CK6 577 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 TTC19Q6DKK2 380 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-214ENST00000550893 OR5M10Q6IEU7 315 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 MFSD12Q6NUT3 480 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 ANGPTL8Q6UXH0 198 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 RGS9BPQ6ZS82 235 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 IKBIPQ70UQ0 350 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 PAGE2Q7Z2X7 111 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 COMTD1Q86VU5 262 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 SLC22A16Q86VW1 577 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 ZDHHC23Q8IYP9 409 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 CLECL1Q8IZS7 167 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 FAM9CQ8IZT9 166 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 CLEC4FQ8N1N0 589 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 SCAIQ8N9R8 606 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 FAM71CQ8NEG0 241 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 OR5L2Q8NGL0 311 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 OR4C3Q8NH37 302 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 FAM76AQ8TAV0 307 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 AGR3Q8TD06 166 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 ATP6V1E2Q96A05 226 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 SDCCAG3Q96C92 435 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 ERP27Q96DN0 273 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 RBM18Q96H35 190 aaKnown RBP4.32□□□□□ -1.72
SCAF11-214ENST00000550893 ART5Q96L15 291 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 DOHHQ9BU89 302 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 REEP4Q9H6H4 257 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 COQ10BQ9H8M1 238 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 PPCSQ9HAB8 311 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 SLC52A3Q9NQ40 469 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 G6PC2Q9NQR9 355 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 C1orf109Q9NX04 203 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 CNIH4Q9P003 139 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 FIS1Q9Y3D6 152 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 FBN1P35555 2871 aaKnown RBP4.32□□□□□ -1.72
SCAF11-214ENST00000550893 ARFGEF3Q5TH69 2177 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 GNG14A0A1W2PPG7 69 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 GOLGA6L10A6NI86 522 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 KCNK2O95069 426 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 OXSR1O95747 527 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 EPPINO95925 133 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 P04436 131 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 HOXD4P09016 255 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 LINGO3P0C6S8 592 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 G6PDP11413 515 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 CPN1P15169 458 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 BGNP21810 368 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 GDF1P27539 372 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 CHRNB4P30926 498 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 TLX1P31314 330 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 PTGER4P35408 488 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 ARL1P40616 181 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 CDKN2CP42773 168 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 SLC6A8P48029 635 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 NCBP2P52298 156 aaKnown RBP eCLIP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 PNLIPRP2P54317 469 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 CDH12P55289 794 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 KCNJ2P63252 427 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 HBA1P69905 142 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 PHEXP78562 749 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 MRPS22P82650 360 aaKnown RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 C2orf80Q0P641 193 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 ZNF155Q12901 538 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 HSPB3Q12988 150 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 TOMM34Q15785 309 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 MAPK14Q16539 360 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 PLPPR5Q32ZL2 321 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 RUNDC3AQ59EK9 446 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 TTMPQ5BVD1 217 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 SH2D4BQ5SQS7 431 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 CCNJQ5T5M9 372 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 NSUN5P2Q63ZY6 315 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 XKRXQ6PP77 449 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 CBLN3Q6UW01 205 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 ARSKQ6UWY0 536 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 NUP54Q7Z3B4 507 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 SERPINA11Q86U17 422 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 MSRB3Q8IXL7 192 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 DND1Q8IYX4 353 aaKnown RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 LIX1Q8N485 282 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 OR5M1Q8NGP8 315 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 CDC26Q8NHZ8 85 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 FIG4Q92562 907 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms