RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 FBXW9Q5XUX1 488 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 FBXW10Q5XX13 1052 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 Q6ZT83 130 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 C22orf34Q6ZV56 151 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 TSEN54Q7Z6J9 526 aaKnown RBP12.15□□□□□ -0.46
TROAP-213ENST00000550709 TMEM200AQ86VY9 491 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 CYP4Z1Q86W10 505 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 MEX3DQ86XN8 651 aaKnown RBP12.15□□□□□ -0.46
TROAP-213ENST00000550709 EPHX4Q8IUS5 362 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 LRRC17Q8N6Y2 441 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 KISS1RQ969F8 398 aaPredicted RBP12.15□□□□□ -0.46
TROAP-213ENST00000550709 CCDC124Q96CT7 223 aaKnown RBP12.15□□□□□ -0.46
TROAP-213ENST00000550709 C14orf79Q96F83 325 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 PYURFQ96I23 114 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 DACH2Q96NX9 599 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 OXGR1Q96P68 337 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 THTPAQ9BU02 230 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 ZNF426Q9BUY5 554 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 SLC19A3Q9BZV2 496 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 ACTR6Q9GZN1 396 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 MEPEQ9NQ76 525 aaPredicted RBP12.15□□□□□ -0.46
TROAP-213ENST00000550709 NANSQ9NR45 359 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 MRPL39Q9NYK5 338 aaKnown RBP12.15□□□□□ -0.46
TROAP-213ENST00000550709 NDUFAF4Q9P032 175 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 B3GAT1Q9P2W7 334 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 UPB1Q9UBR1 384 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 MED31Q9Y3C7 131 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 FAM32AQ9Y421 112 aaKnown RBP12.15□□□□□ -0.46
TROAP-213ENST00000550709 TESMINQ9Y4I5 508 aa12.15□□□□□ -0.46
TROAP-213ENST00000550709 ANKHD1Q8IWZ3 2542 aaKnown RBP12.15□□□□□ -0.46
TROAP-213ENST00000550709 PLPP3O14495 311 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 GYG2O15488 501 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 KRT33AO76009 404 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 OR6A2O95222 327 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 HIST1H2ABP04908 130 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 ADORA3P0DMS8 318 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 HLA-DOBP13765 273 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 PSMB1P20618 241 aaKnown RBP12.14□□□□□ -0.47
TROAP-213ENST00000550709 ATP6V1B2P21281 511 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 IGHV1-2P23083 117 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 DNAJA1P31689 397 aaKnown RBP12.14□□□□□ -0.47
TROAP-213ENST00000550709 RBM34P42696 430 aaKnown RBP12.14□□□□□ -0.47
TROAP-213ENST00000550709 PCYT1AP49585 367 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 SELENOPP49908 381 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 FOXG1P55316 489 aaPredicted RBP12.14□□□□□ -0.47
TROAP-213ENST00000550709 KRTAP10-9P60411 292 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 LSM11P83369 360 aaKnown RBP eCLIP12.14□□□□□ -0.47
TROAP-213ENST00000550709 LGALS3BPQ08380 585 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 FAPQ12884 760 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 ITGADQ13349 1161 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 TRAM2Q15035 370 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 P2RY6Q15077 328 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 POU4F3Q15319 338 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 SFRP5Q5T4F7 317 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 TSPO2Q5TGU0 170 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 NIPAL3Q6P499 406 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 HIST3H2AQ7L7L0 130 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 UEVLDQ8IX04 471 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 OFCC1Q8IZS5 231 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 ARHGAP24Q8N264 748 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 SCAIQ8N9R8 606 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 OR5J2Q8NH18 312 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 HIST1H2ACQ93077 130 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 TMEM45BQ96B21 275 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 S100PBPQ96BU1 408 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 SGTBQ96EQ0 304 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 HS6ST2Q96MM7 605 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 HDHD5Q9BXW7 423 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 FKRPQ9H9S5 495 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 NMNAT1Q9HAN9 279 aaPredicted RBP12.14□□□□□ -0.47
TROAP-213ENST00000550709 SLC7A10Q9NS82 523 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 MAN2C1Q9NTJ4 1040 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 C20orf141Q9NUB4 165 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 PRPF19Q9UMS4 504 aaKnown RBP12.14□□□□□ -0.47
TROAP-213ENST00000550709 GPR52Q9Y2T5 361 aa12.14□□□□□ -0.47
TROAP-213ENST00000550709 CIB4A0PJX0 185 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 A6NNC1 897 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 FZD7O75084 574 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 OR7A10O76100 309 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 MT-ND1P03886 318 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 CDH2P19022 906 aaPredicted RBP12.13□□□□□ -0.47
TROAP-213ENST00000550709 FUT1P19526 365 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 VLDLRP98155 873 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 MS4A2Q01362 244 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 POU3F1Q03052 451 aaPredicted RBP12.13□□□□□ -0.47
TROAP-213ENST00000550709 PUDPQ08623 228 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 STK11Q15831 433 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 CARD17Q5XLA6 110 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 TBPL2Q6SJ96 375 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 ZNF730Q6ZMV8 503 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 BHLHA15Q7RTS1 189 aaPredicted RBP12.13□□□□□ -0.47
TROAP-213ENST00000550709 SLC46A3Q7Z3Q1 461 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 DHFR2Q86XF0 187 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 WFDC8Q8IUA0 241 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 ADPRHL1Q8NDY3 354 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 STEAP2Q8NFT2 490 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 MCUR1Q96AQ8 359 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 TXNDC15Q96J42 360 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 C7orf34Q96L11 122 aa12.13□□□□□ -0.47
TROAP-213ENST00000550709 C1orf21Q9H246 121 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms