RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 SCN9AQ15858 1988 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 TRAV6A0A075B6T7 132 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 KIR2DS5A0A0G2JLQ3 304 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 A0A0U1RQF3 1178 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 TRBC2A0A5B9 178 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 OR2M5A3KFT3 312 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 MTMR11A4FU01 709 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 TRABD2BA6NFA1 517 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 MGAT4DA6NG13 374 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 HEPACAM2A8MVW5 462 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ANKRD66B4E2M5 251 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 DISC1C4P0D8 188 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 H0YIV9 168 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 H3BN98 237 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 KIR2DS3K7RE56 304 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 WWP2O00308 870 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ZNF593O00488 134 aaPredicted RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 CLDN5O00501 218 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 GABRPO00591 440 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 CCL22O00626 93 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 PHYHO14832 338 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 FRS3O43559 492 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 TLX2O43763 284 aaPredicted RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 PCDH7O60245 1069 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 LCMT2O60294 686 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 OR10H3O60404 316 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 TBX19O60806 448 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 NIPSNAP2O75323 286 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 KHDRBS3O75525 346 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 GCM2O75603 506 aaPredicted RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 CDC123O75794 336 aaPredicted RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 ARL6IP5O75915 188 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 OR2F2O95006 317 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 CPSF4O95639 269 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 MT-ND5P03915 603 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 LGALS2P05162 132 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ADRA2AP08913 450 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 LIMS3P0CW19 117 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 LIMS4P0CW20 117 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 MPC1LP0DKB6 136 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 LAMP1P11279 417 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ZNF3P17036 446 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 TYMPP19971 482 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 RAB3BP20337 219 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 PVALBP20472 110 aaPredicted RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 CNR1P21554 472 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 RPS12P25398 132 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 ITGB8P26012 769 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ELAVL4P26378 380 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 GIFP27352 417 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 HTR2AP28223 471 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SSTR2P30874 369 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 HTR1FP30939 366 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 FAUP35544 74 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 HSD17B2P37059 387 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SPAM1P38567 509 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 NNMTP40261 264 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 PMELP40967 661 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 RPL35P42766 123 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 CRATP43155 626 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SLC6A12P48065 614 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 GDI2P50395 445 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 CRYBA2P53672 197 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 GAS1P54826 345 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 HMGCS2P54868 508 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 MAZP56270 477 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 TBX4P57082 545 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 VSX2P58304 361 aaPredicted RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 RAB5BP61020 215 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 CDK5Q00535 292 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 DEFA5Q01523 94 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SEMG2Q02383 582 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SSBP1Q04837 148 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 CRYZQ08257 329 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 ILF3Q12906 894 aaKnown RBP eCLIP3□□□□□ -1.934e-6■■■■□ 20.7
CCNT1-203ENST00000550457 OR2F1Q13607 317 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 HTR4Q13639 388 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ZNF345Q14585 488 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 GINS1Q14691 196 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 NFATC4Q14934 902 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 CNN3Q15417 329 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 HMGN3Q15651 99 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 GPR68Q15743 365 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 CHRNA6Q15825 494 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 MAPK14Q16539 360 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ZNF528Q3MIS6 628 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 MS4A13Q5J8X5 152 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 PIK3CD-AS1Q5SR53 167 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 C10orf91Q5T1B1 145 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 IDNKQ5T6J7 187 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 PRAMEF8Q5VWM4 474 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 PRAMEF7Q5VXH5 474 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ZDHHC20Q5W0Z9 365 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 OLFML2AQ68BL7 652 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 IL31Q6EBC2 164 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 PGBD2Q6P3X8 592 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SFXN4Q6P4A7 337 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 HAGHLQ6PII5 290 aaPredicted RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 ZNF322Q6U7Q0 402 aaPredicted RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 C5orf46Q6UWT4 87 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms