RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 SLC38A1Q9H2H9 487 aa5.8□□□□□ -1.48
UBE2N-204ENST00000549833 KAT8Q9H7Z6 458 aaKnown RBP5.8□□□□□ -1.48
UBE2N-204ENST00000549833 A4GALTQ9NPC4 353 aa5.8□□□□□ -1.48
UBE2N-204ENST00000549833 UBQLN4Q9NRR5 601 aa5.8□□□□□ -1.48
UBE2N-204ENST00000549833 ASF1BQ9NVP2 202 aa5.8□□□□□ -1.48
UBE2N-204ENST00000549833 ABCG2Q9UNQ0 655 aa5.8□□□□□ -1.48
UBE2N-204ENST00000549833 LIPT1Q9Y234 373 aa5.8□□□□□ -1.48
UBE2N-204ENST00000549833 WIF1Q9Y5W5 379 aa5.8□□□□□ -1.48
UBE2N-204ENST00000549833 RTTNQ86VV8 2226 aa5.8□□□□□ -1.48
UBE2N-204ENST00000549833 GCN1Q92616 2671 aaKnown RBP5.8□□□□□ -1.48
UBE2N-204ENST00000549833 TMEM247A6NEH6 219 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 CLDN24A6NM45 220 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 EIF4E1BA6NMX2 242 aaKnown RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 C5orf58C9J3I9 102 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 NPIPA5E9PKD4 350 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 NME4O00746 187 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 TFECO14948 347 aaPredicted RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 ZNHIT1O43257 154 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 BCAS1O75363 584 aaPredicted RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 UGT2B17O75795 530 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 GLSO94925 669 aaPredicted RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 SNX4O95219 450 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 ANGPTL1O95841 491 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 NGFRP08138 427 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 TMEM225BP0DP42 221 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 HPGDP15428 266 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 ZNF24P17028 368 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 RPS4Y1P22090 263 aaKnown RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 TCEA1P23193 301 aaKnown RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 GDF1P27539 372 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 AQP1P29972 269 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 LCN1P31025 176 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 THBS4P35443 961 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 MAGEA5P43359 124 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 CRISP3P54108 245 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 CASP6P55212 293 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 FAM3BP58499 235 aaPredicted RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 PPIAP62937 165 aaKnown RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 CDK6Q00534 326 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 SNTA1Q13424 505 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 TOMM20Q15388 145 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 ZNF141Q15928 474 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 INAQ16352 499 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 ZNF630Q2M218 657 aaPredicted RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 KLHL26Q53HC5 615 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 FAM90A2PQ658T7 463 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 TIGD3Q6B0B8 471 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 REEP3Q6NUK4 255 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 SERPINA11Q86U17 422 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 IFNEQ86WN2 208 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 CALHM3Q86XJ0 350 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 VRK2Q86Y07 508 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 SIAH3Q8IW03 269 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 WDSUB1Q8N9V3 476 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 ZFP62Q8NB50 900 aaPredicted RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 C11orf65Q8NCR3 313 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 SEMA6DQ8NFY4 1073 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 OR2M3Q8NG83 312 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 OR1J4Q8NGS1 313 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 DUSP19Q8WTR2 217 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 WDYHV1Q96HA8 205 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 SH3YL1Q96HL8 342 aaPredicted RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 ZNF583Q96ND8 569 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 BARD1Q99728 777 aaKnown RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 SH3GL1Q99961 368 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 TREX2Q9BQ50 279 aaPredicted RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 ECSITQ9BQ95 431 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 RSPO3Q9BXY4 272 aaPredicted RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 HOXD1Q9GZZ0 328 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 DEFB127Q9H1M4 99 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 DSN1Q9H410 356 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 TMEM38AQ9H6F2 299 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 POLE3Q9NRF9 147 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 THUMPD1Q9NXG2 353 aaKnown RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 MED11Q9P086 117 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 FBXL2Q9UKC9 423 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 BOKQ9UMX3 212 aaPredicted RBP5.79□□□□□ -1.48
UBE2N-204ENST00000549833 NPIPA1Q9UND3 350 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 C15orf41Q9Y2V0 281 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 L3MBTL1Q9Y468 752 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 LIPGQ9Y5X9 500 aa5.79□□□□□ -1.48
UBE2N-204ENST00000549833 DSPPQ9NZW4 1301 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 A0A087X0M5 115 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 C15orf38-AP3S2A0A0A6YYH1 394 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 A0A0G2JPF8 293 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 A0A1B0GX30 115 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 A0A1W2PQD3 144 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 SERINC4A6NH21 518 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 AGAP5A6NIR3 686 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 FAM220BPB1ANY3 271 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 HNRNPCL2B2RXH8 293 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 HNRNPCL3B7ZW38 293 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 GTPBP1O00178 669 aaKnown RBP5.78□□□□□ -1.48
UBE2N-204ENST00000549833 SPRY2O43597 315 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 CDC40O60508 579 aaKnown RBP eCLIP5.78□□□□□ -1.48
UBE2N-204ENST00000549833 HNRNPCL1O60812 293 aaKnown RBP5.78□□□□□ -1.48
UBE2N-204ENST00000549833 GCM2O75603 506 aaPredicted RBP5.78□□□□□ -1.48
UBE2N-204ENST00000549833 PDE9AO76083 593 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 PGM3O95394 542 aa5.78□□□□□ -1.48
UBE2N-204ENST00000549833 CRYABP02511 175 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms