RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 ZIC4Q8N9L1 334 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 OR7A2PQ8NGA2 310 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 MAGEE2Q8TD90 523 aaPredicted RBP11.73□□□□□ -0.53
CDX2-202ENST00000548877 UBASH3BQ8TF42 649 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 ZNF418Q8TF45 676 aaPredicted RBP11.73□□□□□ -0.53
CDX2-202ENST00000548877 GCDHQ92947 438 aaPredicted RBP11.73□□□□□ -0.53
CDX2-202ENST00000548877 COQ8BQ96D53 544 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 SNX18Q96RF0 628 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 KCNS3Q9BQ31 491 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 RBM4Q9BWF3 364 aaKnown RBP11.73□□□□□ -0.53
CDX2-202ENST00000548877 ZNF350Q9GZX5 532 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 PRPF19Q9UMS4 504 aaKnown RBP11.73□□□□□ -0.53
CDX2-202ENST00000548877 SLC35A3Q9Y2D2 325 aa11.73□□□□□ -0.53
CDX2-202ENST00000548877 TMEM129A0AVI4 362 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 ZNF208O43345 1280 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 ERCC1P07992 297 aaPredicted RBP11.72□□□□□ -0.53
CDX2-202ENST00000548877 LINC00032P0C843 101 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 UBTFL6P0CB48 400 aaPredicted RBP11.72□□□□□ -0.53
CDX2-202ENST00000548877 HPCAL1P37235 193 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 MAP2K6P52564 334 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 OR2B6P58173 313 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 HGFACQ04756 655 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 GPR68Q15743 365 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 TRMT5Q32P41 509 aaKnown RBP11.72□□□□□ -0.53
CDX2-202ENST00000548877 TBRG1Q3YBR2 411 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 HIKESHIQ53FT3 197 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 PAQR6Q6TCH4 344 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 ABHD12BQ7Z5M8 362 aaPredicted RBP11.72□□□□□ -0.53
CDX2-202ENST00000548877 GLCCI1Q86VQ1 547 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 SNX32Q86XE0 403 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 PCYOX1LQ8NBM8 494 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 OR5D16Q8NGK9 328 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 WDR60Q8WVS4 1066 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 PMM1Q92871 262 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 NAA11Q9BSU3 229 aaPredicted RBP11.72□□□□□ -0.53
CDX2-202ENST00000548877 SF3B5Q9BWJ5 86 aaKnown RBP11.72□□□□□ -0.53
CDX2-202ENST00000548877 OR11A1Q9GZK7 315 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 RACGAP1Q9H0H5 632 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 SERHL2Q9H4I8 314 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 ZNF696Q9H7X3 374 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 EXOSC3Q9NQT5 275 aaKnown RBP11.72□□□□□ -0.53
CDX2-202ENST00000548877 PCDHGB4Q9UN71 923 aa11.72□□□□□ -0.53
CDX2-202ENST00000548877 LOC100653049A0A140TA62 436 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 VSTM5A8MXK1 200 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 TRIM77I1YAP6 450 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 CYP7B1O75881 506 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 KRT34O76011 436 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 C6orf47O95873 294 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 IGKV3-15P01624 115 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 CECR9P0C854 216 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 IMPDH2P12268 514 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 HOXB1P14653 301 aaPredicted RBP11.71□□□□□ -0.53
CDX2-202ENST00000548877 IFNGR1P15260 489 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 SLC1A3P43003 542 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 HTR3AP46098 478 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 LIMS1P48059 325 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 EMX2Q04743 252 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 TRIP10Q15642 601 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 MAPK14Q16539 360 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 MMEL1Q495T6 779 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 PDLIM3Q53GG5 364 aaPredicted RBP11.71□□□□□ -0.53
CDX2-202ENST00000548877 AGKQ53H12 422 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 COQ5Q5HYK3 327 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 NET1Q7Z628 596 aaPredicted RBP11.71□□□□□ -0.53
CDX2-202ENST00000548877 PEG10Q86TG7 708 aaKnown RBP11.71□□□□□ -0.53
CDX2-202ENST00000548877 POU5F2Q8N7G0 328 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 OR1K1Q8NGR3 316 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 MIPOL1Q8TD10 442 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 BCL2L2Q92843 193 aaPredicted RBP11.71□□□□□ -0.53
CDX2-202ENST00000548877 TMEM186Q96B77 213 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 POLE3Q9NRF9 147 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 SDR39U1Q9NRG7 319 aaPredicted RBP11.71□□□□□ -0.53
CDX2-202ENST00000548877 ATAD3AQ9NVI7 634 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 ZIM2Q9NZV7 527 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 PCDHB10Q9UN67 800 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 NDUFAF1Q9Y375 327 aa11.71□□□□□ -0.53
CDX2-202ENST00000548877 hCG_2039718K7EN88 272 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 BCAS1O75363 584 aaPredicted RBP11.7□□□□□ -0.54
CDX2-202ENST00000548877 NPR2P20594 1047 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 CALCRP30988 508 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 NUDT2P50583 147 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 PLAURQ03405 335 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 SPDYE7PQ495Y7 208 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 PDCD4Q53EL6 469 aaKnown RBP11.7□□□□□ -0.54
CDX2-202ENST00000548877 HACD2Q6Y1H2 254 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 AAED1Q7RTV5 226 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 PGAM4Q8N0Y7 254 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 ZCCHC24Q8N2G6 241 aaKnown RBP11.7□□□□□ -0.54
CDX2-202ENST00000548877 OR9K2Q8NGE7 335 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 ZNF563Q8TA94 476 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 STMN2Q93045 179 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 UTP4Q969X6 686 aaKnown RBP11.7□□□□□ -0.54
CDX2-202ENST00000548877 ROPN1LQ96C74 230 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 C3orf30Q96M34 536 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 ANKRD27Q96NW4 1050 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 JMJD8Q96S16 334 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 THTPAQ9BU02 230 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 AIG1Q9NVV5 245 aa11.7□□□□□ -0.54
CDX2-202ENST00000548877 NOP53Q9NZM5 478 aaKnown RBP11.7□□□□□ -0.54
CDX2-202ENST00000548877 MKLN1Q9UL63 735 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms