RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PIK3IP1Q96FE7 263 aa16.52■□□□□ 0.24
PRPF40B-206ENST00000547764 ASPNQ9BXN1 380 aa16.52■□□□□ 0.24
PRPF40B-206ENST00000547764 LIME1Q9H400 295 aa16.52■□□□□ 0.24
PRPF40B-206ENST00000547764 UPB1Q9UBR1 384 aa16.52■□□□□ 0.24
PRPF40B-206ENST00000547764 EGFL7Q9UHF1 273 aa16.52■□□□□ 0.24
PRPF40B-206ENST00000547764 LOC102725191A0A1B0GVB3 256 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 MS4A18H0YCH9 400 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 KPNA4O00629 521 aaPredicted RBP16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 KLF4O43474 513 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 MT-ATP6P00846 226 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 NQO1P15559 274 aaKnown RBP16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 ZNF43P17038 809 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 DNAJA1P31689 397 aaKnown RBP16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 SELENOPP49908 381 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 FOXG1P55316 489 aaPredicted RBP16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 TAB1Q15750 504 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 MS4A18Q3C1V0 323 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 GLYATQ6IB77 296 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 ALKBH2Q6NS38 261 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 NKAIN4Q8IVV8 208 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 SCAIQ8N9R8 606 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 FAM156AQ8NDB6 213 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 HSD17B8Q92506 261 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 CDRT15Q96T59 188 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 USB1Q9BQ65 265 aaKnown RBP16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 SLC19A3Q9BZV2 496 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 AMBRA1Q9C0C7 1298 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 SLCO5A1Q9H2Y9 848 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 PLEKHF2Q9H8W4 249 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 MRPL39Q9NYK5 338 aaKnown RBP16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 SNX13Q9Y5W8 968 aa16.51■□□□□ 0.23
PRPF40B-206ENST00000547764 ANKRD17O75179 2603 aaKnown RBP16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 PDLIM1O00151 329 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 CH25HO95992 272 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 HPRP00739 348 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 ITGA5P08648 1049 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 LOXP28300 417 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 CLDN17P56750 224 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 MXRA7P84157 204 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 IL1RL1Q01638 556 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 FOXD4Q12950 439 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 PMS2P3Q13401 168 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 C1DQ13901 141 aaKnown RBP16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 ZNF74Q16587 644 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 IFI44LQ53G44 452 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 NIPAL3Q6P499 406 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 C16orf89Q6UX73 402 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 FKBP9P1Q75LS8 142 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 POMGNT2Q8NAT1 580 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 TMEM255BQ8WV15 326 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 GEMIN6Q8WXD5 167 aaKnown RBP16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 HSH2DQ96JZ2 352 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 HS3ST6Q96QI5 342 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 MEPEQ9NQ76 525 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 TAS2R16Q9NYV7 291 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 A4GNTQ9UNA3 340 aa16.5■□□□□ 0.23
PRPF40B-206ENST00000547764 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 CIB4A0PJX0 185 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 PLPP3O14495 311 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 RAD51DO75771 328 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 IFNW1P05000 195 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 THRBP10828 461 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 HLA-DOBP13765 273 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 HSD17B1P14061 328 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 TCN1P20061 433 aaPredicted RBP16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 YAP1P46937 504 aaKnown RBP16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 MNAT1P51948 309 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 LGALS3BPQ08380 585 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 STK11Q15831 433 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 BEX5Q5H9J7 111 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 SAMD4BQ5PRF9 694 aaKnown RBP16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 C9orf135Q5VTT2 229 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 DEFB107AQ8IZN7 70 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 CCDC168Q8NDH2 2452 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 OR5J2Q8NH18 312 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 NSL1Q96IY1 281 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 PRRC1Q96M27 445 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 NDE1Q9NXR1 346 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 CD300AQ9UGN4 299 aa16.49■□□□□ 0.23
PRPF40B-206ENST00000547764 B2RBV5 119 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 J3KTA2 159 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 TRAF3IP2O43734 574 aaPredicted RBP16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 GMNNO75496 209 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 ZNF432O94892 652 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 MT-ND1P03886 318 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 RBM34P42696 430 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 UGT2B15P54855 530 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 PUDPQ08623 228 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 ST3GAL3Q11203 375 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 FXNQ16595 210 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 TIMM23BQ5SRD1 257 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 P2RY8Q86VZ1 359 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 UEVLDQ8IX04 471 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 LRRC17Q8N6Y2 441 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 RBM15BQ8NDT2 890 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 PFN4Q8NHR9 129 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 TMEM239Q8WW34 195 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 PLPPR2Q96GM1 343 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 MUS81Q96NY9 551 aa16.48■□□□□ 0.23
PRPF40B-206ENST00000547764 FKRPQ9H9S5 495 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms