RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 FBXL3Q9UKT7 428 aa7.91□□□□□ -1.14
AC055716.3-201ENST00000547533 RCE1Q9Y256 329 aa7.91□□□□□ -1.14
AC055716.3-201ENST00000547533 ZC3H12DA2A288 527 aaKnown RBP7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 CLDN24A6NM45 220 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 E9PBE3 544 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 SYNGR3O43761 229 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 OR2T1O43869 369 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 LILRA1O75019 489 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 BCAS1O75363 584 aaPredicted RBP7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 SPAG7O75391 227 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 ANP32DO95626 131 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 IGLV1-44P01699 117 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 BPGMP07738 259 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 SAGP10523 405 aaPredicted RBP7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 LBPP18428 481 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 GPR6P46095 362 aaPredicted RBP7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 LIMS1P48059 325 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 CRISP3P54108 245 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 SELENOVP59797 346 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 TUBA1BP68363 451 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 TUBA4AP68366 448 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 SNTB2Q13425 540 aaKnown RBP7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 CCNIQ14094 377 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 CASP8Q14790 479 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 SYPL1Q16563 259 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 FAM174BQ3ZCQ3 159 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 ZNF311Q5JNZ3 666 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 C5orf46Q6UWT4 87 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 DEF8Q6ZN54 512 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 ZNF621Q6ZSS3 439 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 TUBA1AQ71U36 451 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 GSPT2Q8IYD1 628 aaKnown RBP7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 ANKFN1Q8N957 763 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 ZIC4Q8N9L1 334 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 MFSD8Q8NHS3 518 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 STK35Q8TDR2 534 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 TMEM186Q96B77 213 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 ZG16BQ96DA0 208 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 C1orf159Q96HA4 380 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 CCDC115Q96NT0 180 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 DOK1Q99704 481 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 AKTIPQ9H8T0 292 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 SELENONQ9NZV5 590 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 SLC17A7Q9P2U7 560 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 ZNF346Q9UL40 294 aaKnown RBP7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 PCDHB10Q9UN67 800 aa7.9□□□□□ -1.14
AC055716.3-201ENST00000547533 ANK2Q01484 3957 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 CDHR4A6H8M9 788 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 RPL36A-HNRNPH2H7BZ11 118 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 NR5A2O00482 541 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 AIM2O14862 343 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 FRS3O43559 492 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 ZNF432O94892 652 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 MSMBP08118 114 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 RPS4Y1P22090 263 aaKnown RBP7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 ACHEP22303 614 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 CALCRP30988 508 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 RPL14P50914 215 aaKnown RBP7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 CLDN17P56750 224 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 ARF1P84077 181 aaKnown RBP7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 LGALS3BPQ08380 585 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 FUT5Q11128 374 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 RIN1Q13671 783 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 PDCD4Q53EL6 469 aaKnown RBP7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 SPANXN4Q5MJ08 99 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 RNF220Q5VTB9 566 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 ATG16L1Q676U5 607 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 KRT80Q6KB66 452 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 NET1Q7Z628 596 aaPredicted RBP7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 TREML1Q86YW5 311 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 OR52P1PQ8NH57 321 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 FAM216AQ8WUB2 273 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 RDH5Q92781 318 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 SLC25A36Q96CQ1 311 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 OXGR1Q96P68 337 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 OR52E6Q96RD3 313 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 SOX7Q9BT81 388 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 ZNF416Q9BWM5 594 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 SUCNR1Q9BXA5 334 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 ROPN1BQ9BZX4 212 aaPredicted RBP7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 SLC38A1Q9H2H9 487 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 DENND2DQ9H6A0 471 aaPredicted RBP7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 ROPN1Q9HAT0 212 aaPredicted RBP7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 SLC52A3Q9NQ40 469 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 HIF1ANQ9NWT6 349 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 REV1Q9UBZ9 1251 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 IFT52Q9Y366 437 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 RAP2CQ9Y3L5 183 aa7.89□□□□□ -1.15
AC055716.3-201ENST00000547533 TRAV20A0A0B4J274 112 aa7.88□□□□□ -1.15
AC055716.3-201ENST00000547533 IGHV2OR16-5A0A0B4J2B6 119 aa7.88□□□□□ -1.15
AC055716.3-201ENST00000547533 ZNF99A8MXY4 864 aaPredicted RBP7.88□□□□□ -1.15
AC055716.3-201ENST00000547533 FAM157AC9JC47 383 aa7.88□□□□□ -1.15
AC055716.3-201ENST00000547533 RFXANKO14593 260 aa7.88□□□□□ -1.15
AC055716.3-201ENST00000547533 UPK3AO75631 287 aa7.88□□□□□ -1.15
AC055716.3-201ENST00000547533 RAB36O95755 333 aa7.88□□□□□ -1.15
AC055716.3-201ENST00000547533 PNPP00491 289 aa7.88□□□□□ -1.15
AC055716.3-201ENST00000547533 MT-ND5P03915 603 aa7.88□□□□□ -1.15
AC055716.3-201ENST00000547533 SERPINE1P05121 402 aa7.88□□□□□ -1.15
AC055716.3-201ENST00000547533 VIMP08670 466 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms