RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 FAM122CQ6P4D5 195 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 ULK3Q6PHR2 472 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 ZC3H14Q6PJT7 736 aaKnown RBP5.93□□□□□ -1.46
SNHG1-225ENST00000545920 SHISA2Q6UWI4 295 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 C3P1Q6ZMU1 363 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 FAM220AQ7Z4H9 259 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 HSD17B13Q7Z5P4 300 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-225ENST00000545920 KRT77Q7Z794 578 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 GLCCI1Q86VQ1 547 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 SLC35F2Q8IXU6 374 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 C2orf73Q8N5S3 287 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-225ENST00000545920 MOSPD2Q8NHP6 518 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 GPR148Q8TDV2 347 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 SCARB1Q8WTV0 552 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 SMAP2Q8WU79 429 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-225ENST00000545920 CCDC107Q8WV48 283 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 LCN9Q8WX39 176 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 HSD17B8Q92506 261 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 SMARCD2Q92925 531 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 MIB2Q96AX9 1013 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 SGTBQ96EQ0 304 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 PELI1Q96FA3 418 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 MAP6Q96JE9 813 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 RBP7Q96R05 134 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 OR2M4Q96R27 311 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 PELOQ9BRX2 385 aaKnown RBP5.93□□□□□ -1.46
SNHG1-225ENST00000545920 LMF2Q9BU23 707 aaKnown RBP5.93□□□□□ -1.46
SNHG1-225ENST00000545920 G6PC3Q9BUM1 346 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 TRMT61BQ9BVS5 477 aaKnown RBP5.93□□□□□ -1.46
SNHG1-225ENST00000545920 GSDMCQ9BYG8 508 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 NMNAT2Q9BZQ4 307 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 PRDM14Q9GZV8 571 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 SLCO5A1Q9H2Y9 848 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 HRASLSQ9HDD0 168 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 EQTNQ9NQ60 294 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 KLHL1Q9NR64 748 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 GDE1Q9NZC3 331 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 CA5BQ9Y2D0 317 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 ZNF337Q9Y3M9 751 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 TMEM14AQ9Y6G1 99 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 V9GY05 133 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 DENND4AQ7Z401 1863 aa5.93□□□□□ -1.46
SNHG1-225ENST00000545920 BPTFQ12830 3046 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 TRBV2A0A0J9YWF9 115 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 A0A1B0GWA3 101 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 OR2M5A3KFT3 312 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 GLOD5A6NK44 160 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 FAM183AA6NL82 134 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 C5orf67F2Z3F1 127 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 L7N2F9 121 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 MID1O15344 667 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 TPD52L2O43399 206 aaKnown RBP5.92□□□□□ -1.46
SNHG1-225ENST00000545920 XRCC3O43542 346 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 FRS3O43559 492 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 GALR3O60755 368 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-225ENST00000545920 CTNSO60931 367 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 TSC22D2O75157 780 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 KHDRBS3O75525 346 aaKnown RBP5.92□□□□□ -1.46
SNHG1-225ENST00000545920 RP2O75695 350 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 GLCEO94923 617 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 PCDH8O95206 1070 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 TXNDC12O95881 172 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 TFP02787 698 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 CEACAM5P06731 702 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 CD3GP09693 182 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 H2AFB1P0C5Y9 115 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 SLC35E2P0CK97 266 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 PNMTP11086 282 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 UBL4AP11441 157 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 CEBPBP17676 345 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 NFYAP23511 347 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-225ENST00000545920 EDNRAP25101 427 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 DPP4P27487 766 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 GALNSP34059 522 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 PTGS2P35354 604 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 DRD3P35462 400 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 IGFALSP35858 605 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 OR10A3P58181 314 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 OR12D2P58182 307 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 TSPAN5P62079 268 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 RPS11P62280 158 aaKnown RBP eCLIP5.92□□□□□ -1.46
SNHG1-225ENST00000545920 E2F1Q01094 437 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 DUSP2Q05923 314 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 EGR3Q06889 387 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 FGL1Q08830 312 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 RASGEF1BQ0VAM2 473 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 FGFBP1Q14512 234 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 ZMYND11Q15326 602 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 TESK1Q15569 626 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 GAB4Q2WGN9 574 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 SLC25A35Q3KQZ1 300 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 Q499Y3 187 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 SMUG1Q53HV7 270 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 TCTE1Q5JU00 501 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 ZNF776Q68DI1 518 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-225ENST00000545920 FCRL6Q6DN72 434 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 FAM199XQ6PEV8 388 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-225ENST00000545920 FAM111BQ6SJ93 734 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 SLC16A9Q7RTY1 509 aa5.92□□□□□ -1.46
SNHG1-225ENST00000545920 PRSS42Q7Z5A4 293 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms