RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CMTM8Q8IZV2 173 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 BPIFB2Q8N4F0 458 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 TSTD1Q8NFU3 115 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 RLN3Q8WXF3 142 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 PIBF1Q8WXW3 757 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 FGF11Q92914 225 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 ART4Q93070 314 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 MED8Q96G25 268 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 CPB2Q96IY4 423 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 P2RY13Q9BPV8 354 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 CBWD1Q9BRT8 395 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 NDUFAF3Q9BU61 184 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 CHMP4BQ9H444 224 aaKnown RBP2.58□□□□□ -2
SNHG1-224ENST00000545688 NARFLQ9H6Q4 476 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 FANCFQ9NPI8 374 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 MMP17Q9ULZ9 603 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 PCNX1Q96RV3 2341 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 F8P00451 2351 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 PLXND1Q9Y4D7 1925 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 CELSR2Q9HCU4 2923 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 THADAQ6YHU6 1953 aa2.58□□□□□ -2
SNHG1-224ENST00000545688 SPG11Q96JI7 2443 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 ABCA2Q9BZC7 2435 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 IGHV1OR15-9A0A0B4J2B8 117 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 SMIM28A0A1B0GU29 152 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 PSMB11A5LHX3 300 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 SMCO2A6NFE2 343 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 FBLL1A6NHQ2 334 aaKnown RBP2.57□□□□□ -2
SNHG1-224ENST00000545688 C10orf142B7Z368 130 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 I3L4J1 428 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 SGK1O00141 431 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 TLR4O00206 839 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 PRRG1O14668 218 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 B3GAT3O94766 335 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 INSP01308 110 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 HLA-EP13747 358 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 KCNE1P15382 129 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 GNSP15586 552 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 HMGA1P17096 107 aaKnown RBP2.57□□□□□ -2
SNHG1-224ENST00000545688 GLRA2P23416 452 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 CCNCP24863 283 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 ADSSP30520 456 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 MAGEA4P43358 317 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 PSMC5P62195 406 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 GALK2Q01415 458 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 SRYQ05066 204 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 ZNF33AQ06730 810 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 MXD4Q14582 209 aaPredicted RBP2.57□□□□□ -2
SNHG1-224ENST00000545688 PDGFRLQ15198 375 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 PARP6Q2NL67 630 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 CYBRD1Q53TN4 286 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 FAM133BQ5BKY9 247 aaKnown RBP2.57□□□□□ -2
SNHG1-224ENST00000545688 CENPPQ6IPU0 288 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 STAC2Q6ZMT1 411 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 SERPINA9Q86WD7 417 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 CDR2LQ86X02 465 aaPredicted RBP2.57□□□□□ -2
SNHG1-224ENST00000545688 SKA3Q8IX90 412 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 ZNF713Q8N859 430 aaPredicted RBP2.57□□□□□ -2
SNHG1-224ENST00000545688 WDR36Q8NI36 951 aaKnown RBP2.57□□□□□ -2
SNHG1-224ENST00000545688 EXOC6Q8TAG9 804 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 SLC17A9Q9BYT1 436 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 ECT2Q9H8V3 914 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 GHRLQ9UBU3 117 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 FAM153AQ9UHL3 310 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 ZNF225Q9UK10 706 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 CCL26Q9Y258 94 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 IFT52Q9Y366 437 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 ASB3Q9Y575 518 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 SLCO1B1Q9Y6L6 691 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 HELZP42694 1942 aaKnown RBP2.57□□□□□ -2
SNHG1-224ENST00000545688 MYH9P35579 1960 aaKnown RBP2.57□□□□□ -2
SNHG1-224ENST00000545688 CSMD2Q7Z408 3487 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 NF1P21359 2839 aa2.57□□□□□ -2
SNHG1-224ENST00000545688 MUC22E2RYF6 1773 aaPredicted RBP2.56□□□□□ -2
SNHG1-224ENST00000545688 CELSR1Q9NYQ6 3014 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 MYO18AQ92614 2054 aaKnown RBP2.56□□□□□ -2
SNHG1-224ENST00000545688 CACNA1DQ01668 2161 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 MACROD2A1Z1Q3 448 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 TMEM89A2RUT3 159 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 A6NDX4 124 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 E7EWF7 191 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 RRP8O43159 456 aaKnown RBP2.56□□□□□ -2
SNHG1-224ENST00000545688 ZNF264O43296 627 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 TRAPPC3O43617 180 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 ERLIN2O94905 339 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 LYPLA2O95372 231 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 TGDSO95455 350 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 ZNF823P16415 610 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 GABRG2P18507 467 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 ATF6P18850 670 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 U2AF2P26368 475 aaKnown RBP eCLIP2.56□□□□□ -23e-8■■■□□ 17.8
SNHG1-224ENST00000545688 GABRR2P28476 465 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 NTSP30990 170 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 RPL4P36578 427 aaKnown RBP2.56□□□□□ -2
SNHG1-224ENST00000545688 QARSP47897 775 aaKnown RBP2.56□□□□□ -2
SNHG1-224ENST00000545688 ATXN3P54252 364 aaPredicted RBP2.56□□□□□ -2
SNHG1-224ENST00000545688 RND3P61587 244 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 VLDLRP98155 873 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 PPP2R5CQ13362 524 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 PLD1Q13393 1074 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms