RNA–Protein interactions for RNA: ENST00000543254.1

KLHL42-204, Transcript of kelch like family member 42, human

TSL 2

Gene KLHL42, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHL42-204	ENST00000543254	P2RY6	Q15077	328 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	ZNF74	Q16587	644 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	FGD3	Q5JSP0	725 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	NANOGNB	Q7Z5D8	188 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	KDM8	Q8N371	416 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	FAM86B1	Q8N7N1	296 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	ADPRHL1	Q8NDY3	354 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	STEAP2	Q8NFT2	490 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	OR5J2	Q8NH18	312 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	PFN4	Q8NHR9	129 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	LINC01560	Q8TB33	94 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	KISS1R	Q969F8	398 aa	Predicted RBP	11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	CLPTM1L	Q96KA5	538 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	SEPHS2	Q99611	448 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	PIP5K1A	Q99755	562 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	PRSS27	Q9BQR3	290 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	MCCC2	Q9HCC0	563 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	MRPL39	Q9NYK5	338 aa	Known RBP	11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	CRIM1	Q9NZV1	1036 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	NDUFAF4	Q9P032	175 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	SEC14L4	Q9UDX3	406 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	PRSS50	Q9UI38	385 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	ZNF229	Q9UJW7	825 aa		11.15	□□□□□ -0.62
KLHL42-204	ENST00000543254	CACNA1C	Q13936	2221 aa		11.15	□□□□□ -0.63
KLHL42-204	ENST00000543254	ASH1L	Q9NR48	2969 aa	Known RBP	11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	ARHGAP21	Q5T5U3	1957 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	HTR3E	A5X5Y0	456 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	OR6C65	A6NJZ3	312 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	LRRN3	E7EW58	273 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	C11orf98	E9PRG8	122 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	RNF13	O43567	381 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	OR7A10	O76100	309 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	CNOT4	O95628	575 aa	Known RBP	11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	ADORA3	P0DMS8	318 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	SAG	P10523	405 aa	Predicted RBP	11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	IFI30	P13284	250 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	PPP3CB	P16298	524 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	ATP6V1B2	P21281	511 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	PCYT1A	P49585	367 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	P2RY4	P51582	365 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	UGT2B15	P54855	530 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	CLDN17	P56750	224 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	CBX1	P83916	185 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	SPIB	Q01892	262 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	POU3F1	Q03052	451 aa	Predicted RBP	11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	LTB	Q06643	244 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	POU4F3	Q15319	338 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	FAM98B	Q52LJ0	330 aa	Known RBP	11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	FBXW9	Q5XUX1	488 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	ANKRD34A	Q69YU3	496 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	NIPAL3	Q6P499	406 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254		Q6ZT83	130 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	CCDC121	Q6ZUS5	278 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	CREB3L2	Q70SY1	520 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	CXorf67	Q86X51	503 aa	Predicted RBP	11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	ZDHHC21	Q8IVQ6	265 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	POMGNT2	Q8NAT1	580 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	ACOT11	Q8WXI4	607 aa	Predicted RBP	11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	TMEM45B	Q96B21	275 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	DACH2	Q96NX9	599 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	ZNF385A	Q96PM9	386 aa	Known RBP	11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	ZNF347	Q96SE7	839 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	ZNF426	Q9BUY5	554 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	ACTR6	Q9GZN1	396 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	ANKRD19P	Q9H560	264 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	ASB6	Q9NWX5	421 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	ZNF226	Q9NYT6	803 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	GPR52	Q9Y2T5	361 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	NOX1	Q9Y5S8	564 aa		11.14	□□□□□ -0.63
KLHL42-204	ENST00000543254	INTS1	Q8N201	2190 aa	Known RBP	11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	CIB4	A0PJX0	185 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	ZNF726	A6NNF4	738 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	BLOC1S5-TXNDC5	H3BN57	136 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	PLPP3	O14495	311 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	FFAR1	O14842	300 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	SLC43A1	O75387	559 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	DIRAS1	O95057	198 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	EPX	P11678	715 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	FUT1	P19526	365 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	PSMB1	P20618	241 aa	Known RBP	11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	DNAJA1	P31689	397 aa	Known RBP	11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	VLDLR	P98155	873 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	TLE4	Q04727	773 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	CHRNB3	Q05901	458 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	FAP	Q12884	760 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	TRAP1	Q12931	704 aa	Known RBP	11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	ITGAD	Q13349	1161 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	LCN8	Q6JVE9	175 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	ALKBH2	Q6NS38	261 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	STAC2	Q6ZMT1	411 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	TMEM200A	Q86VY9	491 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	MED12L	Q86YW9	2145 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	NRM	Q8IXM6	262 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	RNF113B	Q8IZP6	322 aa	Known RBP	11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	GABRG1	Q8N1C3	465 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	PIK3C3	Q8NEB9	887 aa		11.13	□□□□□ -0.63
KLHL42-204	ENST00000543254	ANKK1	Q8NFD2	765 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms