RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TSFMP43897 325 aaKnown RBP12.16□□□□□ -0.46
TNC-212ENST00000542877 TGFBR3Q03167 851 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 FAM71E1Q6IPT2 247 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 OPN5Q6U736 354 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 IL1F10Q8WWZ1 152 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 TAAR8Q969N4 342 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 MSI2Q96DH6 328 aaKnown RBP12.16□□□□□ -0.46
TNC-212ENST00000542877 ZNF225Q9UK10 706 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 TRBV11-1A0A0K0K1C0 115 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 RNF212BA8MTL3 300 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 SLC6A11P48066 632 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 ACSM1Q08AH1 577 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 STEAP1BQ6NZ63 245 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 FAM122CQ6P4D5 195 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 DLEU7Q6UYE1 221 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 TOPAZ1Q8N9V7 1692 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 A0A0B4J2A0 478 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 HMX2A2RU54 273 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 TNFSF12O43508 249 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 PRICKLE3O43900 615 aaPredicted RBP12.16□□□□□ -0.46
TNC-212ENST00000542877 GJA5P36382 358 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 CCR9P51686 369 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 ALKBH1Q13686 389 aaKnown RBP12.16□□□□□ -0.46
TNC-212ENST00000542877 SLC35D3Q5M8T2 416 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 B3GLCTQ6Y288 498 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 NANOGP1Q8N7R0 232 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 MRPL43Q8N983 215 aaKnown RBP12.16□□□□□ -0.46
TNC-212ENST00000542877 NKX2-4Q9H2Z4 354 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 TAAR2Q9P1P5 351 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 STEAP1Q9UHE8 339 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 SHPKQ9UHJ6 478 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 PTRH2Q9Y3E5 179 aaKnown RBP12.16□□□□□ -0.46
TNC-212ENST00000542877 MYO18AQ92614 2054 aaKnown RBP12.16□□□□□ -0.46
TNC-212ENST00000542877 MYH4Q9Y623 1939 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 PRAMEF27A3QJZ7 478 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 MPPED1O15442 326 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 HBE1P02100 147 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 CLEC2LP0C7M8 214 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 CST5P28325 142 aaPredicted RBP12.16□□□□□ -0.46
TNC-212ENST00000542877 PFN3P60673 137 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 UBE2KP61086 200 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 YPEL5P62699 121 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 PRAMEF9Q5VWM5 478 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 PXT1Q8NFP0 134 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 OR13C9Q8NGT0 318 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 PIGCQ92535 297 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 FGF13Q92913 245 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 TOE1Q96GM8 510 aaKnown RBP12.16□□□□□ -0.46
TNC-212ENST00000542877 TEX37Q96LM6 180 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 NMNAT3Q96T66 252 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 SERTAD4Q9NUC0 356 aa12.16□□□□□ -0.46
TNC-212ENST00000542877 ZNF223Q9UK11 482 aaPredicted RBP12.16□□□□□ -0.46
TNC-212ENST00000542877 TRAV36DV7A0A075B6V5 113 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 A0A1B0GWA3 101 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 TRABD2BA6NFA1 517 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 ARGFXA6NJG6 315 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 CEBPZOSA8MTT3 80 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 ADAM12O43184 909 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 PMS2P2O95744 297 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 MSR1P21757 451 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 ADAMTSL4Q6UY14 1074 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 DUS3LQ96G46 650 aaKnown RBP12.15□□□□□ -0.46
TNC-212ENST00000542877 TCEAL2Q9H3H9 227 aaPredicted RBP12.15□□□□□ -0.46
TNC-212ENST00000542877 TUBG2Q9NRH3 451 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 ZNF705GA8MUZ8 300 aaPredicted RBP12.15□□□□□ -0.46
TNC-212ENST00000542877 PIP5K1CO60331 668 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 PDGFAP04085 211 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 LPLP06858 475 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 MAKP20794 623 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 SRPXP78539 464 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 FAM111BQ6SJ93 734 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 FBXW12Q6X9E4 464 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 SHISA6Q6ZSJ9 500 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 TMEM255BQ8WV15 326 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 PSMF1Q92530 271 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 ZNF566Q969W8 418 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 RBMXL1Q96E39 390 aaKnown RBP12.15□□□□□ -0.46
TNC-212ENST00000542877 C20orf85Q9H1P6 137 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 MUTYHQ9UIF7 546 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 TMEM129A0AVI4 362 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 WDPCPO95876 746 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 TRIM23P36406 574 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 PPT1P50897 306 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 SLC35A2P78381 396 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 BATFQ16520 125 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 ZMAT1Q5H9K5 638 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 CD300LGQ6UXG3 332 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 SLC35D2Q76EJ3 337 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 SLC7A6Q92536 515 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 GPR78Q96P69 363 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 SLC25A21Q9BQT8 299 aaPredicted RBP12.15□□□□□ -0.46
TNC-212ENST00000542877 PRMT8Q9NR22 394 aaPredicted RBP12.15□□□□□ -0.46
TNC-212ENST00000542877 FAM155AB1AL88 458 aaPredicted RBP12.15□□□□□ -0.46
TNC-212ENST00000542877 RPS19P39019 145 aaKnown RBP12.15□□□□□ -0.46
TNC-212ENST00000542877 SLC48A1Q6P1K1 146 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 PRICKLE2Q7Z3G6 844 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 SLC22A24Q8N4F4 322 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 LMNTD1Q8N9Z9 388 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 FAM174AQ8TBP5 190 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms