RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 PDIA2Q13087 525 aaKnown RBP4.05□□□□□ -1.76
LIMS1-214ENST00000542845 ZNF154Q13106 437 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 CBFBQ13951 182 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 GALEQ14376 348 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 PDK3Q15120 406 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 TSTQ16762 297 aaKnown RBP4.05□□□□□ -1.76
LIMS1-214ENST00000542845 MSMPQ1L6U9 139 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 DEFB112Q30KQ8 113 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 SYT14P1Q58G82 188 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 SPDYAQ5MJ70 313 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 KPRPQ5T749 579 aaPredicted RBP4.05□□□□□ -1.76
LIMS1-214ENST00000542845 ABLIM2Q6H8Q1 611 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 CDC73Q6P1J9 531 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 TMEM154Q6P9G4 183 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 ZNF551Q7Z340 670 aaPredicted RBP4.05□□□□□ -1.76
LIMS1-214ENST00000542845 ABHD12BQ7Z5M8 362 aaPredicted RBP4.05□□□□□ -1.76
LIMS1-214ENST00000542845 GPAT4Q86UL3 456 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 OR2L13Q8N349 312 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 C11orf44Q8N8P7 122 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 COX18Q8N8Q8 333 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 FBXO36Q8NEA4 188 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 OR6Y1Q8NGX8 325 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 LINC01006Q8NI28 216 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 KIF18AQ8NI77 898 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 ZNF563Q8TA94 476 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 BCL2L2Q92843 193 aaPredicted RBP4.05□□□□□ -1.76
LIMS1-214ENST00000542845 MISP3Q96FF7 219 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 SLC47A1Q96FL8 570 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 C16orf58Q96GQ5 468 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 TIMD4Q96H15 378 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 MS4A14Q96JA4 679 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 NAA11Q9BSU3 229 aaPredicted RBP4.05□□□□□ -1.76
LIMS1-214ENST00000542845 RSPO3Q9BXY4 272 aaPredicted RBP4.05□□□□□ -1.76
LIMS1-214ENST00000542845 CHIAQ9BZP6 476 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 OR11A1Q9GZK7 315 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 VPS11Q9H270 941 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 FN3KRPQ9HA64 309 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 NOX3Q9HBY0 568 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 TPSG1Q9NRR2 321 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 SLC6A13Q9NSD5 602 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 SIRT3Q9NTG7 399 aaPredicted RBP4.05□□□□□ -1.76
LIMS1-214ENST00000542845 DECR2Q9NUI1 292 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 NECAP2Q9NVZ3 263 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 NSMCE4AQ9NXX6 385 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 VPS29Q9UBQ0 182 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 LEF1Q9UJU2 399 aaPredicted RBP4.05□□□□□ -1.76
LIMS1-214ENST00000542845 PURGQ9UJV8 347 aaKnown RBP4.05□□□□□ -1.76
LIMS1-214ENST00000542845 SLC9A8Q9Y2E8 581 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 SNX13Q9Y5W8 968 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 FLVCR1Q9Y5Y0 555 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 CACNG2Q9Y698 323 aa4.05□□□□□ -1.76
LIMS1-214ENST00000542845 IGHV1-69-2A0A0G2JMI3 117 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 TCRBV5S2A0A599 114 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 ZC3H12DA2A288 527 aaKnown RBP4.04□□□□□ -1.76
LIMS1-214ENST00000542845 CCDC151A5D8V7 595 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 C5orf63A6NC05 138 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 CCDC154A6NI56 674 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 TTC36A6NLP5 189 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 NUDT19A8MXV4 375 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 CLDN25C9JDP6 229 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 ZNF587BE7ETH6 402 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 PPP6CO00743 305 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 FOXH1O75593 365 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 RP2O75695 350 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 OR4F21O95013 312 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 NGFRP08138 427 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 SBK2P0C263 348 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 RAC2P15153 192 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 CBR1P16152 277 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 NR4A1P22736 598 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 PEX2P28328 305 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 RYKP34925 604 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 CRYBB2P43320 205 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 CDH13P55290 713 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 RAE1P78406 368 aaKnown RBP4.04□□□□□ -1.76
LIMS1-214ENST00000542845 POU6F2P78424 691 aaPredicted RBP4.04□□□□□ -1.76
LIMS1-214ENST00000542845 ARF1P84077 181 aaKnown RBP4.04□□□□□ -1.76
LIMS1-214ENST00000542845 GALK2Q01415 458 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 CD69Q07108 199 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 PIGFQ07326 219 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 ACSM2AQ08AH3 577 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 FASTKD3Q14CZ7 662 aaKnown RBP4.04□□□□□ -1.76
LIMS1-214ENST00000542845 DUSP5Q16690 384 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 HFEQ30201 348 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 NRN1LQ496H8 165 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 ATP6AP1LQ52LC2 224 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 STEAP4Q687X5 459 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 ACSM2BQ68CK6 577 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 ANKRD26P1Q6NSI1 321 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 PAQR6Q6TCH4 344 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 BRD3OSQ6XYD6 125 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 USP51Q70EK9 711 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 OVCH2Q7RTZ1 564 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 MTERF4Q7Z6M4 381 aaKnown RBP4.04□□□□□ -1.76
LIMS1-214ENST00000542845 MDP1Q86V88 176 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 CTAGE3PQ8IX95 158 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 ZBED8Q8IZ13 594 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 PARP8Q8N3A8 854 aa4.04□□□□□ -1.76
LIMS1-214ENST00000542845 PTGR2Q8N8N7 351 aaPredicted RBP4.04□□□□□ -1.76
LIMS1-214ENST00000542845 CDRT4Q8N9R6 151 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms