RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 DAG1Q14118 895 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 PDCD2Q16342 344 aaPredicted RBP15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 COX20Q5RI15 118 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 KRT80Q6KB66 452 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 ZNF836Q6ZNA1 936 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 MDP1Q86V88 176 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 VRK2Q86Y07 508 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 CADM2Q8N3J6 435 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 VPS37AQ8NEZ2 397 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 ANKK1Q8NFD2 765 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 FAM216AQ8WUB2 273 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 CCDC115Q96NT0 180 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 ZIM3Q96PE6 472 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 MRPL37Q9BZE1 423 aaKnown RBP15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 NARFLQ9H6Q4 476 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 LPAR2Q9HBW0 351 aa15.34■□□□□ 0.05
CLSTN3-214ENST00000542663 WNK2Q9Y3S1 2297 aa15.33■□□□□ 0.05
CLSTN3-214ENST00000542663 ITM2AO43736 263 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 HPXP02790 462 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 NUDT17P0C025 328 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 TFPTP0C1Z6 253 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 PNMTP11086 282 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 PRG2P13727 222 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 COL8A2P25067 703 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 ARR3P36575 388 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 HILS1P60008 231 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 GNA13Q14344 377 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 WBP2NLQ6ICG8 309 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 THSD4Q6ZMP0 1018 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 C1orf229Q6ZS94 237 aaPredicted RBP15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 ZNF440Q8IYI8 595 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 ZNF418Q8TF45 676 aaPredicted RBP15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 GCDHQ92947 438 aaPredicted RBP15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 CRLF2Q9HC73 371 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 GPR35Q9HC97 309 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 B3GAT1Q9P2W7 334 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 SEC14L4Q9UDX3 406 aa15.33■□□□□ 0.04
CLSTN3-214ENST00000542663 TLDC2A0PJX2 215 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 SYNGR3O43761 229 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 SEC14L2O76054 403 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 BPGMP07738 259 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 MSMBP08118 114 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 NR4A1P22736 598 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 CDKN2CP42773 168 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 GPR6P46095 362 aaPredicted RBP15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 EGR4Q05215 589 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 DPY19L1Q2PZI1 675 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 CEACAM16Q2WEN9 425 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 PEG10Q86TG7 708 aaKnown RBP15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 ZNF781Q8N8C0 355 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 MRPL24Q96A35 216 aaKnown RBP15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 TEX37Q96LM6 180 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 LRRC37BQ96QE4 947 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 PTDSS2Q9BVG9 487 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 B3GNT2Q9NY97 397 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 BTNL2Q9UIR0 455 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 PCDHB10Q9UN67 800 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 RCE1Q9Y256 329 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 CMAHPQ9Y471 501 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 CHST2Q9Y4C5 530 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 DSPPQ9NZW4 1301 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 ARHGAP32A7KAX9 2087 aa15.32■□□□□ 0.04
CLSTN3-214ENST00000542663 CCDC154A6NI56 674 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 M0R233 179 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 AVPP01185 164 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 GAAP10253 952 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 NR2F1P10589 423 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 CREB1P16220 341 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 EVX1P49640 407 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 ARFIP2P53365 341 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 SLC9B1Q4ZJI4 515 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 PHYHD1Q5SRE7 291 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 USP43Q70EL4 1123 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 PEX5LQ8IYB4 626 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 IL17RDQ8NFM7 739 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 OR52P1PQ8NH57 321 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 MFSD8Q8NHS3 518 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 PNPT1Q8TCS8 783 aaKnown RBP15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 YIPF5Q969M3 257 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 MS4A3Q96HJ5 214 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 ZNF75AQ96N20 296 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 TREM2Q9NZC2 230 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 REV1Q9UBZ9 1251 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 PRDM4Q9UKN5 801 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 GRIP1Q9Y3R0 1128 aa15.31■□□□□ 0.04
CLSTN3-214ENST00000542663 TGP01266 2768 aa15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 A0A096LPI6 279 aa15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 E9PBE3 544 aa15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 FZD7O75084 574 aa15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 SLC43A1O75387 559 aa15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 TFP02787 698 aa15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 GSNP06396 782 aa15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 SAGP10523 405 aaPredicted RBP15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 ZNF35P13682 527 aa15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 ZNF43P17038 809 aa15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 TCN1P20061 433 aaPredicted RBP15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 ACHEP22303 614 aa15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 S100A3P33764 101 aa15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 ETV4P43268 484 aa15.3■□□□□ 0.04
CLSTN3-214ENST00000542663 RPS5P46782 204 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms