RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 ADORA3P0DMS8 318 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 SLC16A1P53985 500 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 ELF3P78545 371 aaPredicted RBP15.26■□□□□ 0.03
LIG1-204ENST00000542460 SLC17A1Q14916 467 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 HSPB2Q16082 182 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 HMBOX1Q6NT76 420 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 PGBD2Q6P3X8 592 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 SHQ1Q6PI26 577 aaKnown RBP15.26■□□□□ 0.03
LIG1-204ENST00000542460 NCCRP1Q6ZVX7 275 aaPredicted RBP15.26■□□□□ 0.03
LIG1-204ENST00000542460 OAFQ86UD1 273 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 GPAT4Q86UL3 456 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 MEX3DQ86XN8 651 aaKnown RBP15.26■□□□□ 0.03
LIG1-204ENST00000542460 GCNT2Q8N0V5 402 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 OR10G2Q8NGC3 310 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 OR9Q2Q8NGE9 314 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 GNPDA2Q8TDQ7 276 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 CCDC120Q96HB5 630 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 OXGR1Q96P68 337 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 PKP2Q99959 881 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 TACO1Q9BSH4 297 aaKnown RBP15.26■□□□□ 0.03
LIG1-204ENST00000542460 BCO1Q9HAY6 547 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 TAS2R5Q9NYW4 299 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 EMC3Q9P0I2 261 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 PDP1Q9P0J1 537 aaPredicted RBP15.26■□□□□ 0.03
LIG1-204ENST00000542460 ING1Q9UK53 422 aaPredicted RBP15.26■□□□□ 0.03
LIG1-204ENST00000542460 IGKV3D-15A0A087WSY6 115 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 A0A0G2JNJ9 132 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 LOC102725191A0A1B0GVB3 256 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 MS4A18H0YCH9 400 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 GPR171O14626 319 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 KLF4O43474 513 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 SS18L1O75177 396 aaPredicted RBP15.25■□□□□ 0.03
LIG1-204ENST00000542460 GASTP01350 101 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 YES1P07947 543 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 TMIGD3P0DMS9 266 aaPredicted RBP15.25■□□□□ 0.03
LIG1-204ENST00000542460 FPR3P25089 353 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 PUDPQ08623 228 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 ZP4Q12836 540 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 ESPL1Q14674 2120 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 POU4F3Q15319 338 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 MS4A18Q3C1V0 323 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 FAM214BQ7L5A3 538 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 KDM8Q8N371 416 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 AQP11Q8NBQ7 271 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 NAXEQ8NCW5 288 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 OR5K1Q8NHB7 308 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 GPA33Q99795 319 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 SEMA6AQ9H2E6 1030 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 FANCFQ9NPI8 374 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 Q9UFV3 132 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 ERRFI1Q9UJM3 462 aaPredicted RBP15.25■□□□□ 0.03
LIG1-204ENST00000542460 CLEC4AQ9UMR7 237 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 MGAT4BQ9UQ53 548 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 HIF3AQ9Y2N7 669 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 RELNP78509 3460 aa15.25■□□□□ 0.03
LIG1-204ENST00000542460 FLNBO75369 2602 aaKnown RBP15.24■□□□□ 0.03
LIG1-204ENST00000542460 A0A1W2PNV4 684 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 UNC119BA6NIH7 251 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 ZNF724A8MTY0 619 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 TSPAN19P0C672 248 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 AHCYP23526 432 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 CTSSP25774 331 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 RPS4XP62701 263 aaKnown RBP15.24■□□□□ 0.03
LIG1-204ENST00000542460 IL1RL1Q01638 556 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 FOXF2Q12947 444 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 TSPAN31Q12999 210 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 GUSBP1Q15486 140 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 TAF11Q15544 211 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 ZBED5Q49AG3 693 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 TMEM201Q5SNT2 666 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 EEF1A1P5Q5VTE0 462 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 PXKQ7Z7A4 578 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 HIPK1Q86Z02 1210 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 TUSC5Q8IXB3 177 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 SVOPLQ8N434 492 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 OR9K2Q8NGE7 335 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 OR51A7Q8NH64 312 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 TNFRSF13CQ96RJ3 184 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 FEVQ99581 238 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 DGCR6LQ9BY27 220 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 B3GAT1Q9P2W7 334 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 ZNF629Q9UEG4 869 aaPredicted RBP15.24■□□□□ 0.03
LIG1-204ENST00000542460 EMC9Q9Y3B6 208 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 NOX1Q9Y5S8 564 aa15.24■□□□□ 0.03
LIG1-204ENST00000542460 G3V2T6 193 aa15.23■□□□□ 0.03
LIG1-204ENST00000542460 H0YHG0 523 aa15.23■□□□□ 0.03
LIG1-204ENST00000542460 PTP4A3O75365 173 aa15.23■□□□□ 0.03
LIG1-204ENST00000542460 HPRP00739 348 aa15.23■□□□□ 0.03
LIG1-204ENST00000542460 ZNF23P17027 643 aa15.23■□□□□ 0.03
LIG1-204ENST00000542460 ZNF43P17038 809 aa15.23■□□□□ 0.03
LIG1-204ENST00000542460 UQCRC1P31930 480 aa15.23■□□□□ 0.03
LIG1-204ENST00000542460 AQP2P41181 271 aa15.23■□□□□ 0.03
LIG1-204ENST00000542460 GSSP48637 474 aa15.23■□□□□ 0.03
LIG1-204ENST00000542460 SMSP52788 366 aa15.23■□□□□ 0.03
LIG1-204ENST00000542460 PRPS1P60891 318 aa15.23■□□□□ 0.03
LIG1-204ENST00000542460 ADORA2A-AS1P86434 159 aa15.23■□□□□ 0.03
LIG1-204ENST00000542460 RPL18Q07020 188 aaKnown RBP15.23■□□□□ 0.03
LIG1-204ENST00000542460 C1DQ13901 141 aaKnown RBP15.23■□□□□ 0.03
LIG1-204ENST00000542460 ZDHHC13Q8IUH4 622 aa15.23■□□□□ 0.03
LIG1-204ENST00000542460 UEVLDQ8IX04 471 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms