RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 KIR2DL1P43626 348 aaPredicted RBP14.05□□□□□ -0.16
CNOT9-208ENST00000542068 LCN6P62502 163 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 PON3Q15166 354 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 FGD2Q7Z6J4 655 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 OR13H1Q8NG92 308 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 OR5M1Q8NGP8 315 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 SLC22A18Q96BI1 424 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 SMIM19Q96E16 107 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 ZFYVE21Q9BQ24 234 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 ULBP3Q9BZM4 244 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 TTYH1Q9H313 450 aaPredicted RBP14.05□□□□□ -0.16
CNOT9-208ENST00000542068 LYARQ9NX58 379 aaKnown RBP14.05□□□□□ -0.16
CNOT9-208ENST00000542068 ABRACLQ9P1F3 81 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 PCDHGA5Q9Y5G8 931 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 DOCK8Q8NF50 2099 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 ZNF10P21506 573 aaPredicted RBP14.05□□□□□ -0.16
CNOT9-208ENST00000542068 DUSP8Q13202 625 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 ABHD13Q7L211 337 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 GRAMD2AQ8IUY3 354 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 FAM160A2Q8N612 972 aaPredicted RBP14.05□□□□□ -0.16
CNOT9-208ENST00000542068 MRGPRX1Q96LB2 322 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 MCCC2Q9HCC0 563 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 NRIP3Q9NQ35 241 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 C2orf42Q9NWW7 574 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 WBP1LQ9NX94 342 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 POMT2Q9UKY4 750 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 KIAA1549LQ6ZVL6 1849 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 RTTNQ86VV8 2226 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 TVP23AA6NH52 213 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 PLRG1O43660 514 aaKnown RBP14.05□□□□□ -0.16
CNOT9-208ENST00000542068 SERPINA3P01011 423 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 SLC6A6P31641 620 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 FNTBP49356 437 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 VASPP50552 380 aaPredicted RBP14.05□□□□□ -0.16
CNOT9-208ENST00000542068 PAQR7Q86WK9 346 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 TMPRSS12Q86WS5 348 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 OR52R1Q8NGF1 315 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 RSC1A1Q92681 617 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 BMFQ96LC9 184 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 SRA1Q9HD15 236 aaKnown RBP14.05□□□□□ -0.16
CNOT9-208ENST00000542068 KLHL9Q9P2J3 617 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 NCDNQ9UBB6 729 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 IKZF2Q9UKS7 526 aa14.05□□□□□ -0.16
CNOT9-208ENST00000542068 NUP210Q8TEM1 1887 aaPredicted RBP14.04□□□□□ -0.16
CNOT9-208ENST00000542068 SPDEFO95238 335 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 GALP22466 123 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 CDK2P24941 298 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 CTHP32929 405 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 NUP62P37198 522 aaPredicted RBP14.04□□□□□ -0.16
CNOT9-208ENST00000542068 RPS11P62280 158 aaKnown RBP eCLIP14.04□□□□□ -0.16
CNOT9-208ENST00000542068 TAGLNQ01995 201 aaKnown RBP14.04□□□□□ -0.16
CNOT9-208ENST00000542068 TMEM81Q6P7N7 255 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 PRSS42Q7Z5A4 293 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 AVL9Q8NBF6 648 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 DVL3Q92997 716 aaPredicted RBP14.04□□□□□ -0.16
CNOT9-208ENST00000542068 ZNF764Q96H86 408 aaPredicted RBP14.04□□□□□ -0.16
CNOT9-208ENST00000542068 TPSD1Q9BZJ3 242 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 SOHLH2Q9NX45 425 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 MYEF2Q9P2K5 600 aaKnown RBP14.04□□□□□ -0.16
CNOT9-208ENST00000542068 ING1Q9UK53 422 aaPredicted RBP14.04□□□□□ -0.16
CNOT9-208ENST00000542068 VPS13AQ96RL7 3174 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 RP1P56715 2156 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 KHNYNO15037 678 aaKnown RBP14.04□□□□□ -0.16
CNOT9-208ENST00000542068 NANOS3P60323 173 aaKnown RBP14.04□□□□□ -0.16
CNOT9-208ENST00000542068 NFATC4Q14934 902 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 TRAM1Q15629 374 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 C2orf68Q2NKX9 166 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 UBE2NLQ5JXB2 153 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 ZNF425Q6IV72 752 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 RELL2Q8NC24 303 aaPredicted RBP14.04□□□□□ -0.16
CNOT9-208ENST00000542068 OR6M1Q8NGM8 313 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 HGDQ93099 445 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 SLC25A38Q96DW6 304 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 ARPC5LQ9BPX5 153 aa14.04□□□□□ -0.16
CNOT9-208ENST00000542068 PITHD1Q9GZP4 211 aaPredicted RBP14.04□□□□□ -0.16
CNOT9-208ENST00000542068 PCDHGA9Q9Y5G4 932 aaKnown RBP14.04□□□□□ -0.16
CNOT9-208ENST00000542068 LSSP48449 732 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 ALG11Q2TAA5 492 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 OR2L13Q8N349 312 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 OR2A5Q96R48 311 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 GFI1Q99684 422 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 NTMQ9P121 344 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 CPNE7Q9UBL6 633 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 FBXL2Q9UKC9 423 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 ABCA7Q8IZY2 2146 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 hCG_1807616A0A1W2PRN6 198 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 GPR89AB7ZAQ6 455 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 H0YC42 278 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 HRKO00198 91 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 DOK2O60496 412 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 SC5DO75845 299 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 ZFPL1O95159 310 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 GPR89BP0CG08 455 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 HPGDP15428 266 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 HNRNPA2B1P22626 353 aaKnown RBP14.03□□□□□ -0.16
CNOT9-208ENST00000542068 NFYAP23511 347 aaPredicted RBP14.03□□□□□ -0.16
CNOT9-208ENST00000542068 TPMTP51580 245 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 GUCA2AQ02747 115 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 FAM53BQ14153 422 aa14.03□□□□□ -0.16
CNOT9-208ENST00000542068 ST8SIA4Q92187 359 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms