RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 TRAM1Q15629 374 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 RAET1LQ5VY80 246 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 CCDC190Q86UF4 302 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 C16orf52Q8NHV5 167 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 ARHGAP9Q9BRR9 750 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 NOX3Q9HBY0 568 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 CUTCQ9NTM9 273 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 SPTAN1Q13813 2472 aaKnown RBP14.82□□□□□ -0.04
VARS2-212ENST00000542001 FAM221BA6H8Z2 402 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 ZNF593O00488 134 aaPredicted RBP14.82□□□□□ -0.04
VARS2-212ENST00000542001 TCRBP04435 133 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 CT62P0C5K7 136 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 PTGS2P35354 604 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 RAB11BQ15907 218 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 OR10K2Q6IF99 312 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 C16orf47Q6ZP98 133 aaPredicted RBP14.82□□□□□ -0.04
VARS2-212ENST00000542001 VASH1Q7L8A9 365 aaPredicted RBP14.82□□□□□ -0.04
VARS2-212ENST00000542001 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.82□□□□□ -0.04
VARS2-212ENST00000542001 OR5B2Q96R09 309 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 AUNIPQ9H7T9 357 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 LIN7BQ9HAP6 207 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 BCL2L10Q9HD36 194 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 FAM60AQ9NP50 221 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 UPB1Q9UBR1 384 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 ZNF337Q9Y3M9 751 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 SLC22A7Q9Y694 548 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 PDCD11Q14690 1871 aaKnown RBP14.81□□□□□ -0.04
VARS2-212ENST00000542001 SFTPBP07988 381 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 MEP1BQ16820 701 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 DNM1P34Q6PK57 102 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 ALKAL2Q6UX46 152 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 CREB3L1Q96BA8 519 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 RANBP3Q9H6Z4 567 aaPredicted RBP14.81□□□□□ -0.04
VARS2-212ENST00000542001 CGGBP1Q9UFW8 167 aaPredicted RBP14.81□□□□□ -0.04
VARS2-212ENST00000542001 F5H0A9 414 aaPredicted RBP14.81□□□□□ -0.04
VARS2-212ENST00000542001 MPIG6BO95866 241 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 LSSP48449 732 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 SLC18B1Q6NT16 456 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 SPACA5Q96QH8 159 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 CTRCQ99895 268 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 NCDNQ9UBB6 729 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 REV1Q9UBZ9 1251 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 HRKO00198 91 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 PIPP12273 146 aaPredicted RBP14.81□□□□□ -0.04
VARS2-212ENST00000542001 CRYBA2P53672 197 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 FAPQ12884 760 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 CORO6Q6QEF8 472 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 INO80EQ8NBZ0 244 aaPredicted RBP14.81□□□□□ -0.04
VARS2-212ENST00000542001 C17orf47Q8NEP4 570 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 LPAR4Q99677 370 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 SCP2D1Q9UJQ7 156 aa14.81□□□□□ -0.04
VARS2-212ENST00000542001 SLC22A5O76082 557 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 SLC35E2P0CK97 266 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 POU3F4P49335 361 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 C12orf73Q69YU5 71 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 TOR1AIP2Q8NFQ8 470 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 ENKD1Q9H0I2 346 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 NYNRINQ9P2P1 1898 aaKnown RBP14.8□□□□□ -0.04
VARS2-212ENST00000542001 DVL2O14641 736 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 GALR3O60755 368 aaPredicted RBP14.8□□□□□ -0.04
VARS2-212ENST00000542001 LTBQ06643 244 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 DLX2Q07687 328 aaPredicted RBP14.8□□□□□ -0.04
VARS2-212ENST00000542001 BEST3Q8N1M1 668 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 TP53I13Q8NBR0 393 aaPredicted RBP14.8□□□□□ -0.04
VARS2-212ENST00000542001 GPR119Q8TDV5 335 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 TMEM234Q8WY98 164 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 CRB3Q9BUF7 120 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 YBX2Q9Y2T7 364 aaKnown RBP14.8□□□□□ -0.04
VARS2-212ENST00000542001 KANTRA0A1W2PQU2 76 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 FITM1A5D6W6 292 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 OR14I1A6ND48 311 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 OR5K3A6NET4 321 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 TRABD2BA6NFA1 517 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 TMEM221A6NGB7 291 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 SLC33A1O00400 549 aaPredicted RBP14.8□□□□□ -0.04
VARS2-212ENST00000542001 UTS2O95399 124 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 EVX1P49640 407 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 TPBGQ13641 420 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 ARHGAP11BQ3KRB8 267 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 RBM24Q9BX46 236 aaKnown RBP14.8□□□□□ -0.04
VARS2-212ENST00000542001 ZNF350Q9GZX5 532 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 UBQLN2Q9UHD9 624 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 KLHL21Q9UJP4 597 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 SCML1Q9UN30 329 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 ZNF281Q9Y2X9 895 aa14.8□□□□□ -0.04
VARS2-212ENST00000542001 A0A1W2PPV9 198 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 CHP2O43745 196 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 RAB3DO95716 219 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 KLK3P07288 261 aaPredicted RBP14.79□□□□□ -0.04
VARS2-212ENST00000542001 NPR2P20594 1047 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 CD1CP29017 333 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 HMGA2P52926 109 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 SERTAD2Q14140 314 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 RNASE10Q5GAN6 216 aaKnown RBP14.79□□□□□ -0.04
VARS2-212ENST00000542001 TCTE1Q5JU00 501 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 SLC22A10Q63ZE4 541 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 PLXDC1Q8IUK5 500 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 IL17RDQ8NFM7 739 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 OR52N1Q8NH53 320 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 NXF5Q9H1B4 397 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms