RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ZNF554Q86TJ5 538 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 LRRC52Q8N7C0 313 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 LRRC75AQ8NAA5 344 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 OR5B17Q8NGF7 314 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 OR4D6Q8NGJ1 314 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 FAM110BQ8TC76 370 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 RND1Q92730 232 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 SLC35C1Q96A29 364 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 FAM131CQ96AQ9 280 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 C18orf25Q96B23 403 aaPredicted RBP4.87□□□□□ -1.63
DDB1-219ENST00000541513 NUS1Q96E22 293 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 SIGLEC10Q96LC7 697 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 BBC3Q96PG8 261 aaPredicted RBP4.87□□□□□ -1.63
DDB1-219ENST00000541513 CSPG4P5Q96PW8 444 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 CTRCQ99895 268 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 CCDC3Q9BQI4 270 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 FEM1AQ9BSK4 669 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 CCDC28BQ9BUN5 200 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 MCRIP2Q9BUT9 160 aaKnown RBP4.87□□□□□ -1.63
DDB1-219ENST00000541513 ASB8Q9H765 288 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 SLC40A1Q9NP59 571 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 OR2S2Q9NQN1 319 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 ARMC1Q9NVT9 282 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 GPATCH2LQ9NWQ4 482 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 MARCH5Q9NX47 278 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 LNPEPQ9UIQ6 1025 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 IKZF3Q9UKT9 509 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 EIF3LQ9Y262 564 aaKnown RBP4.87□□□□□ -1.63
DDB1-219ENST00000541513 PRG3Q9Y2Y8 225 aaPredicted RBP4.87□□□□□ -1.63
DDB1-219ENST00000541513 PTPRJQ12913 1337 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 PLXNA3P51805 1871 aa4.87□□□□□ -1.63
DDB1-219ENST00000541513 ZNF638Q14966 1978 aaKnown RBP4.87□□□□□ -1.63
DDB1-219ENST00000541513 GREB1Q4ZG55 1949 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 DENND4CQ5VZ89 1909 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 A0A0A6YYH2 397 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 TEX13DA0A0J9YY54 714 aaPredicted RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 EPOPA6NHQ4 379 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 A6NJ64 397 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 C2CD4BA6NLJ0 364 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 SRRM3A6NNA2 597 aaPredicted RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 MIF4GDA9UHW6 222 aaKnown RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 B8ZZF3 427 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 SIVA1O15304 175 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 MID1O15344 667 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 SCELO95171 688 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 ETHE1O95571 254 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 ANXA5P08758 320 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 CT62P0C5K7 136 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 OCMP0CE72 109 aaPredicted RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 TRIM49P0CI25 452 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 TRIM49CP0CI26 452 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 CHRNB1P11230 501 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 GNLYP22749 145 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 ZFP36P26651 326 aaKnown RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 FEN1P39748 380 aaKnown RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 RPL13AP40429 203 aaKnown RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 GRIA3P42263 894 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 TGM4P49221 684 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 MRPL19P49406 292 aaKnown RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 PGFP49763 221 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 TAF6P49848 677 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 PSMD4P55036 377 aaKnown RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 ZNF77Q15935 545 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 UAP1Q16222 522 aaPredicted RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 VPS26BQ4G0F5 336 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 PHLDA2Q53GA4 152 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 C2CD6Q53TS8 623 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 C1orf189Q5VU69 101 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 ZNF691Q5VV52 312 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 C9orf57Q5W0N0 161 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 SLC22A10Q63ZE4 541 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 BHLHB9Q6PI77 547 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 FAM151BQ6UXP7 276 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 DEF8Q6ZN54 512 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 TAC4Q86UU9 113 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 ITIH5Q86UX2 942 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 ERI1Q8IV48 349 aaKnown RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 LRTM2Q8N967 370 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 CCDC112Q8NEF3 446 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 OR10A7Q8NGE5 316 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 OR4A4PQ8NGN8 299 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 OR13C5Q8NGS8 318 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 MAGEE2Q8TD90 523 aaPredicted RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 ZNF473Q8WTR7 871 aaKnown RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 SLC38A5Q8WUX1 472 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 PIH1D2Q8WWB5 315 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 CCDC127Q96BQ5 260 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 MYEOVQ96EZ4 313 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 CDCA3Q99618 268 aaPredicted RBP4.86□□□□□ -1.63
DDB1-219ENST00000541513 DGCR6LQ9BY27 220 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 ZBP1Q9H171 429 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 SLC38A1Q9H2H9 487 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 OR51B5Q9H339 312 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 UGT1A10Q9HAW8 530 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 C2orf42Q9NWW7 574 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 STMN3Q9NZ72 180 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 ANAPC7Q9UJX3 599 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 COQ4Q9Y3A0 265 aa4.86□□□□□ -1.63
DDB1-219ENST00000541513 FAM32AQ9Y421 112 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms