RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 IFT46Q9NQC8 304 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 SLCO1C1Q9NYB5 712 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 SLC17A4Q9Y2C5 497 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 ZNF175Q9Y473 711 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 COL6A6A6NMZ7 2263 aa9.56□□□□□ -0.88
CHFR-219ENST00000541341 PLSCR5A0PG75 271 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 D6RAR5 112 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 H0YC42 278 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 M0R3H8 397 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 NDUFA2O43678 99 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 C1QCP02747 245 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 EIF4EP06730 217 aaKnown RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 CEACAM5P06731 702 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 DBIP07108 87 aaKnown RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 CSF1P09603 554 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 UCHL1P09936 223 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 ACSM4P0C7M7 580 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 EPXP11678 715 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 ZNF10P21506 573 aaPredicted RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 ACADLP28330 430 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 SLC6A6P31641 620 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 THBS2P35442 1172 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 RBM34P42696 430 aaKnown RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 SSR2P43308 183 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 AGFG1P52594 562 aaKnown RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 PDX1P52945 283 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 UCNP55089 124 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 SEC61A1P61619 476 aaKnown RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 STXBP1P61764 594 aaKnown RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 CLN3Q13286 438 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 TSTA3Q13630 321 aaPredicted RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 TOMM20Q15388 145 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 SF1Q15637 639 aaKnown RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 ZNF658BQ4V348 819 aaPredicted RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 FLYWCH1Q4VC44 716 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 CLVS2Q5SYC1 327 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 DMKNQ6E0U4 476 aaPredicted RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 RGS7BPQ6MZT1 257 aaPredicted RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 TMPRSS11FQ6ZWK6 438 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 NLRC3Q7RTR2 1065 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 TRAPPC5Q8IUR0 188 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 CPOQ8IVL8 374 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 OR4F15Q8NGB8 312 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 OR51G2Q8NGK0 314 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 MOSPD2Q8NHP6 518 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 ADAMTS15Q8TE58 950 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 ST8SIA4Q92187 359 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 CCDC74AQ96AQ1 378 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 C12orf66Q96MD2 445 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 WDR92Q96MX6 357 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 SFXN2Q96NB2 322 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 CCNL2Q96S94 520 aaPredicted RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 ZNF649Q9BS31 505 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 ALX4Q9H161 411 aaPredicted RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 UBQLN3Q9H347 655 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 EGLN3Q9H6Z9 239 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 METTL17Q9H7H0 456 aaPredicted RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 BRD7Q9NPI1 651 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 KLHL1Q9NR64 748 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 EVA1BQ9NVM1 165 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 TAS2R10Q9NYW0 307 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 ATXN7L1Q9ULK2 861 aaPredicted RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 ASF1AQ9Y294 204 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 YARS2Q9Y2Z4 477 aaKnown RBP9.55□□□□□ -0.88
CHFR-219ENST00000541341 OR1A2Q9Y585 309 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 SDK2Q58EX2 2172 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 BSNQ9UPA5 3926 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 MYO18BQ8IUG5 2567 aa9.55□□□□□ -0.88
CHFR-219ENST00000541341 A0A0A6YYD5 115 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 C2orf92A0A1B0GVN3 265 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 TMEM202A6NGA9 273 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 ZNF593O00488 134 aaPredicted RBP9.54□□□□□ -0.88
CHFR-219ENST00000541341 DXOO77932 396 aaKnown RBP9.54□□□□□ -0.88
CHFR-219ENST00000541341 HIST1H2ABP04908 130 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 FGF2P09038 288 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 RPA2P15927 270 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 GDNFP39905 211 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 PREPP48147 710 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 PSMD4P55036 377 aaKnown RBP9.54□□□□□ -0.88
CHFR-219ENST00000541341 CASP9P55211 416 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 CAV3P56539 151 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 CTAG1AP78358 180 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 CCL7P80098 99 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 DUSP8Q13202 625 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 RBMS2Q15434 407 aaKnown RBP9.54□□□□□ -0.88
CHFR-219ENST00000541341 CEBPEQ15744 281 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 FAM214AQ32MH5 1076 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 ZNF791Q3KP31 576 aaPredicted RBP9.54□□□□□ -0.88
CHFR-219ENST00000541341 C6orf132Q5T0Z8 1188 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 PXDC1Q5TGL8 231 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 ZNF626Q68DY1 528 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 ZNF613Q6PF04 617 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 ARL9Q6T311 187 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 SEZ6L2Q6UXD5 910 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 HIST3H2AQ7L7L0 130 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 LINGO2Q7L985 606 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 VASH2Q86V25 355 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 MCATQ8IVS2 390 aaKnown RBP9.54□□□□□ -0.88
CHFR-219ENST00000541341 CDH26Q8IXH8 852 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 OR10H4Q8NGA5 316 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms