RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.85■□□□□ 0.93
LEMD3-203ENST00000541171 A0A096LPI6 279 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 A0A0G2JPF8 293 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 TMEM247A6NEH6 219 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 TMEM229AB2RXF0 380 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 HNRNPCL2B2RXH8 293 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 HNRNPCL3B7ZW38 293 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 HNRNPCL1O60812 293 aaKnown RBP20.84■□□□□ 0.93
LEMD3-203ENST00000541171 TGFAP01135 160 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 HNRNPCL4P0DMR1 293 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 PNMTP11086 282 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 IDO1P14902 403 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 PAX7P23759 505 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 GTF2E2P29084 291 aaKnown RBP20.84■□□□□ 0.93
LEMD3-203ENST00000541171 ARF1P84077 181 aaKnown RBP20.84■□□□□ 0.93
LEMD3-203ENST00000541171 PDCD4Q53EL6 469 aaKnown RBP20.84■□□□□ 0.93
LEMD3-203ENST00000541171 ZNF311Q5JNZ3 666 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 MFSD8Q8NHS3 518 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 MGARPQ8TDB4 240 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 LINC00470Q9BZP3 86 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 BPESC1Q9GZL8 116 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 NELFAQ9H3P2 528 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 MYOZ1Q9NP98 299 aaPredicted RBP20.84■□□□□ 0.93
LEMD3-203ENST00000541171 THAP1Q9NVV9 213 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 CRNNQ9UBG3 495 aaPredicted RBP20.84■□□□□ 0.93
LEMD3-203ENST00000541171 SEC14L4Q9UDX3 406 aa20.84■□□□□ 0.93
LEMD3-203ENST00000541171 CELA3BP08861 270 aa20.83■□□□□ 0.93
LEMD3-203ENST00000541171 ZNF43P17038 809 aa20.83■□□□□ 0.93
LEMD3-203ENST00000541171 ZSWIM7Q19AV6 140 aa20.83■□□□□ 0.93
LEMD3-203ENST00000541171 TNFAIP8L3Q5GJ75 292 aa20.83■□□□□ 0.93
LEMD3-203ENST00000541171 C6orf10Q5SRN2 563 aa20.83■□□□□ 0.93
LEMD3-203ENST00000541171 OR4F15Q8NGB8 312 aa20.83■□□□□ 0.93
LEMD3-203ENST00000541171 MAGEE2Q8TD90 523 aaPredicted RBP20.83■□□□□ 0.93
LEMD3-203ENST00000541171 VPS33AQ96AX1 596 aa20.83■□□□□ 0.93
LEMD3-203ENST00000541171 KTI12Q96EK9 354 aaPredicted RBP20.83■□□□□ 0.93
LEMD3-203ENST00000541171 ITCHQ96J02 903 aa20.83■□□□□ 0.93
LEMD3-203ENST00000541171 RAB1BQ9H0U4 201 aa20.83■□□□□ 0.93
LEMD3-203ENST00000541171 PLK3Q9H4B4 646 aa20.83■□□□□ 0.93
LEMD3-203ENST00000541171 RMND5AQ9H871 391 aa20.83■□□□□ 0.93
LEMD3-203ENST00000541171 FTCDNL1E5RQL4 147 aa20.82■□□□□ 0.92
LEMD3-203ENST00000541171 PDE5AO76074 875 aa20.82■□□□□ 0.92
LEMD3-203ENST00000541171 NUDT7P0C024 238 aa20.82■□□□□ 0.92
LEMD3-203ENST00000541171 ZCCHC18P0CG32 403 aa20.82■□□□□ 0.92
LEMD3-203ENST00000541171 HNF1AP20823 631 aa20.82■□□□□ 0.92
LEMD3-203ENST00000541171 THBS4P35443 961 aa20.82■□□□□ 0.92
LEMD3-203ENST00000541171 IDH3GP51553 393 aaPredicted RBP20.82■□□□□ 0.92
LEMD3-203ENST00000541171 WDR4P57081 412 aaKnown RBP20.82■□□□□ 0.92
LEMD3-203ENST00000541171 HGFACQ04756 655 aa20.82■□□□□ 0.92
LEMD3-203ENST00000541171 EFNB3Q15768 340 aa20.82■□□□□ 0.92
LEMD3-203ENST00000541171 SLC9B1Q4ZJI4 515 aa20.82■□□□□ 0.92
LEMD3-203ENST00000541171 ZNF317Q96PQ6 595 aaPredicted RBP20.82■□□□□ 0.92
LEMD3-203ENST00000541171 PTDSS2Q9BVG9 487 aa20.82■□□□□ 0.92
LEMD3-203ENST00000541171 C19orf24Q9BVV8 132 aa20.82■□□□□ 0.92
LEMD3-203ENST00000541171 RPS6KB2Q9UBS0 482 aa20.82■□□□□ 0.92
LEMD3-203ENST00000541171 IFT52Q9Y366 437 aa20.82■□□□□ 0.92
LEMD3-203ENST00000541171 LRP5LA4QPB2 252 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 hCG_2039718K7EN88 272 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 SLC43A1O75387 559 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 IGLV1-44P01699 117 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 ZNF23P17027 643 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 THBS2P35442 1172 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 PPOXP50336 477 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 SH3BGRP55822 239 aaPredicted RBP20.81■□□□□ 0.92
LEMD3-203ENST00000541171 IL1RL1Q01638 556 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 EGR4Q05215 589 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 C1DQ13901 141 aaKnown RBP20.81■□□□□ 0.92
LEMD3-203ENST00000541171 C3orf36Q3SXR2 165 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 MYPOPQ86VE0 399 aaPredicted RBP20.81■□□□□ 0.92
LEMD3-203ENST00000541171 ZCCHC24Q8N2G6 241 aaKnown RBP20.81■□□□□ 0.92
LEMD3-203ENST00000541171 GPR137CQ8N3F9 429 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 ZNF540Q8NDQ6 660 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 OXGR1Q96P68 337 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 SOX7Q9BT81 388 aa20.81■□□□□ 0.92
LEMD3-203ENST00000541171 THUMPD1Q9NXG2 353 aaKnown RBP20.81■□□□□ 0.92
LEMD3-203ENST00000541171 SH3PXD2BA1X283 911 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 SNNO75324 88 aaPredicted RBP20.8■□□□□ 0.92
LEMD3-203ENST00000541171 STAMBPO95630 424 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 HOXB1P14653 301 aaPredicted RBP20.8■□□□□ 0.92
LEMD3-203ENST00000541171 CBR1P16152 277 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 CBLP22681 906 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 CAPZA2P47755 286 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 POLR2JP52435 117 aaKnown RBP20.8■□□□□ 0.92
LEMD3-203ENST00000541171 NPRL3Q12980 569 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 SPATA21Q7Z572 469 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 SVOPLQ8N434 492 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 NUP37Q8NFH4 326 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 OR9I1Q8NGQ6 314 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 MAL2Q969L2 176 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 GPR35Q9HC97 309 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 ZIM2Q9NZV7 527 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 RCE1Q9Y256 329 aa20.8■□□□□ 0.92
LEMD3-203ENST00000541171 TMEM120BA0PK00 339 aa20.79■□□□□ 0.92
LEMD3-203ENST00000541171 VSTM5A8MXK1 200 aa20.79■□□□□ 0.92
LEMD3-203ENST00000541171 SLCO1B7G3V0H7 640 aa20.79■□□□□ 0.92
LEMD3-203ENST00000541171 ZNF432O94892 652 aa20.79■□□□□ 0.92
LEMD3-203ENST00000541171 IGKV3-15P01624 115 aa20.79■□□□□ 0.92
LEMD3-203ENST00000541171 DAOP14920 347 aa20.79■□□□□ 0.92
LEMD3-203ENST00000541171 NPR2P20594 1047 aa20.79■□□□□ 0.92
LEMD3-203ENST00000541171 RGNQ15493 299 aa20.79■□□□□ 0.92
LEMD3-203ENST00000541171 CEACAM16Q2WEN9 425 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms