RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SELENOWP63302 87 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 LTBQ06643 244 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 TIMM23BQ5SRD1 257 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 TSPO2Q5TGU0 170 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 H1FNTQ75WM6 255 aaPredicted RBP11.55□□□□□ -0.56
LTBR-208ENST00000541005 AAED1Q7RTV5 226 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 WFDC8Q8IUA0 241 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 P3H2Q8IVL5 708 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 UBE2J2Q8N2K1 259 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 MBD6Q96DN6 1003 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 PIK3IP1Q96FE7 263 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 BOD1Q96IK1 185 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 MOGAT1Q96PD6 335 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 HS3ST6Q96QI5 342 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 CCT8L2Q96SF2 557 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 PRSS27Q9BQR3 290 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 TMEM204Q9BSN7 226 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 LIME1Q9H400 295 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 SLC7A10Q9NS82 523 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 GMPR2Q9P2T1 348 aaKnown RBP11.55□□□□□ -0.56
LTBR-208ENST00000541005 SEC14L4Q9UDX3 406 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 SLC7A7Q9UM01 511 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 USF3Q68DE3 2245 aa11.55□□□□□ -0.56
LTBR-208ENST00000541005 TEP1Q99973 2627 aaKnown RBP11.55□□□□□ -0.56
LTBR-208ENST00000541005 TRAF3IP2O43734 574 aaPredicted RBP11.54□□□□□ -0.56
LTBR-208ENST00000541005 SHOX2O60902 331 aaPredicted RBP11.54□□□□□ -0.56
LTBR-208ENST00000541005 ZNF432O94892 652 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 ATE1O95260 518 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 FAM107AO95990 144 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 IGF2P01344 180 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 RAF1P04049 648 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 ZNF43P17038 809 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 TNFRSF1BP20333 461 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 RBM34P42696 430 aaKnown RBP11.54□□□□□ -0.56
LTBR-208ENST00000541005 FAPQ12884 760 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 ZNF74Q16587 644 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 FXNQ16595 210 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 OR7E24Q6IFN5 339 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 C17orf78Q8N4C9 275 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 RNF217Q8TC41 542 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 LZICQ8WZA0 190 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 MUS81Q96NY9 551 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 KCTD14Q9BQ13 255 aaPredicted RBP11.54□□□□□ -0.56
LTBR-208ENST00000541005 ASPNQ9BXN1 380 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 LINC00470Q9BZP3 86 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 FKRPQ9H9S5 495 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 NGBQ9NPG2 151 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 TAGLN3Q9UI15 199 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 HIVEP1P15822 2718 aa11.54□□□□□ -0.56
LTBR-208ENST00000541005 MS4A18H0YCH9 400 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 RAD51DO75771 328 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 HPRP00739 348 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 DNASE1P24855 282 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 MPGP29372 298 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 OR1E2P47887 323 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 SELENOPP49908 381 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 IST1P53990 364 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 TAS2R41P59536 307 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 TGFBR3Q03167 851 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 PUDPQ08623 228 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 KRT72Q14CN4 511 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 PPA1Q15181 289 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 GABRA6Q16445 453 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 MS4A18Q3C1V0 323 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 TTC33Q6PID6 262 aaPredicted RBP11.53□□□□□ -0.56
LTBR-208ENST00000541005 NHLRC1Q6VVB1 395 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 DEF8Q6ZN54 512 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 CBLL1Q75N03 491 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 ABHD12BQ7Z5M8 362 aaPredicted RBP11.53□□□□□ -0.56
LTBR-208ENST00000541005 PGAM4Q8N0Y7 254 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 ANKK1Q8NFD2 765 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 GEMIN6Q8WXD5 167 aaKnown RBP11.53□□□□□ -0.56
LTBR-208ENST00000541005 PLPPR2Q96GM1 343 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 TPD52L3Q96J77 140 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 PRRC1Q96M27 445 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 FOXC2Q99958 501 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 CXXC4Q9H2H0 198 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 ARL8BQ9NVJ2 186 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 UPB1Q9UBR1 384 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 PLEKHA6Q9Y2H5 1048 aa11.53□□□□□ -0.56
LTBR-208ENST00000541005 PLPP3O14495 311 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 GSTA4O15217 222 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 AKAP8O43823 692 aaKnown RBP11.52□□□□□ -0.57
LTBR-208ENST00000541005 HSD17B1P14061 328 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 NQO1P15559 274 aaKnown RBP11.52□□□□□ -0.57
LTBR-208ENST00000541005 PTNP21246 168 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 FOXG1P55316 489 aaPredicted RBP11.52□□□□□ -0.57
LTBR-208ENST00000541005 CLDN17P56750 224 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 PIN1Q13526 163 aaPredicted RBP11.52□□□□□ -0.57
LTBR-208ENST00000541005 STK11Q15831 433 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 SPATS1Q496A3 300 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 NCMAPQ5T1S8 102 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 GKAP1Q5VSY0 366 aaPredicted RBP11.52□□□□□ -0.57
LTBR-208ENST00000541005 NIPAL3Q6P499 406 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 SPNS3Q6ZMD2 512 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 C20orf204Q6ZNR8 217 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 PXKQ7Z7A4 578 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 VTCN1Q7Z7D3 282 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 OFCC1Q8IZS5 231 aa11.52□□□□□ -0.57
LTBR-208ENST00000541005 TMEM123Q8N131 208 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms