RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TANGO2Q6ICL3 276 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZNF613Q6PF04 617 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 POMZP3Q6PJE2 187 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 C17orf107Q6ZR85 190 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 KCTD20Q7Z5Y7 419 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 METTL27Q8N6F8 245 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 SPPL3Q8TCT6 385 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 THEM6Q8WUY1 208 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 GAL3ST3Q96A11 431 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZNF524Q96C55 264 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 SPACA7Q96KW9 195 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR2A5Q96R48 311 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 MNTQ99583 582 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 SRMSQ9H3Y6 488 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZMAT3Q9HA38 289 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 ABRACLQ9P1F3 81 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 CHRNA9Q9UGM1 479 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZNF230Q9UIE0 474 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 RWDD3Q9Y3V2 267 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 NPTNQ9Y639 398 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 BRWD1Q9NSI6 2320 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 TBC1D3DA0A087WVF3 549 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 TBC1D3IA0A087WXS9 549 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 TRAV1-2A0A0B4J238 106 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 TBC1D3LB9A6J9 549 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 GOSR2O14653 212 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 ARL6IP5O75915 188 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 TBC1D3HP0C7X1 549 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 UGT2B7P16662 529 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 SPI1P17947 270 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 ACAA2P42765 397 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 FNTBP49356 437 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 MAZP56270 477 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 TAS2R43P59537 309 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 HLXQ14774 488 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 BEX5Q5H9J7 111 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 TBC1D3CQ6IPX1 549 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 SLITRK4Q8IW52 837 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 TBC1D3Q8IZP1 549 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 FCAMRQ8WWV6 532 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR1E3Q8WZA6 343 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 TOE1Q96GM8 510 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 HDAC8Q9BY41 377 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 KLHL9Q9P2J3 617 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 MAFFQ9ULX9 164 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 C19orf53Q9UNZ5 99 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR6C74A6NCV1 312 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZNF879B4DU55 563 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 MCRIP1C9JLW8 97 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 B3GALT2O43825 422 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 RDH16O75452 317 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 TSPAN9O75954 239 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 KAT7O95251 611 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 NFYAP23511 347 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 SLC6A6P31641 620 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 NUP62P37198 522 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 ACTR1BP42025 376 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 ADPRHP54922 357 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 ACTR1AP61163 376 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 ENPP7Q6UWV6 458 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 ARSKQ6UWY0 536 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 GLDNQ6ZMI3 551 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 ADGRG3Q86Y34 549 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 C10orf53Q8N6V4 93 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 FAM174AQ8TBP5 190 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 FAM3CQ92520 227 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 FGF13Q92913 245 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 PITHD1Q9GZP4 211 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 COPZ2Q9P299 210 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 LRIT1Q9P2V4 623 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 PLATP00750 562 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 THBS1P07996 1170 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 RPS4Y1P22090 263 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 AQP2P41181 271 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 CDKN2AP42771 156 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 CCR4P51679 360 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 TAS2R20P59543 309 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 SQSTM1Q13501 440 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 PON3Q15166 354 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 PCGF3Q3KNV8 242 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 LRRC37A5PQ49AS3 106 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 FCRL6Q6DN72 434 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 LEG1Q6P5S2 330 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 NPEPL1Q8NDH3 523 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR4C3Q8NH37 302 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 NR4A3Q92570 626 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 SLC25A28Q96A46 364 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 GAS2L1Q99501 681 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 LYARQ9NX58 379 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 DNAJB12Q9NXW2 375 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 GTF2A1LQ9UNN4 478 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 SLC22A7Q9Y694 548 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 RP1P56715 2156 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 MUC22E2RYF6 1773 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 PCNX3Q9H6A9 2034 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 TMEM272A0A1B0GTI8 110 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 MFSD2BA6NFX1 497 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 H0YGG7 62 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 AIPO00170 330 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 BRINP1O60477 761 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms