RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 CLOCKO15516 846 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 ZNHIT1O43257 154 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 OR10H3O60404 316 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 E2F6O75461 281 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 AQP8O94778 261 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 AKR7A3O95154 331 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 LDLRP01130 860 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 ASAH2BP0C7U1 165 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 SAGP10523 405 aaPredicted RBP15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 CD8BP10966 210 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 GSTM3P21266 225 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 UGT2B15P54855 530 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 PUDPQ08623 228 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 C1DQ13901 141 aaKnown RBP15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 SLC17A1Q14916 467 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 SEM1Q6ZVN7 128 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 MRGPRGQ86SM5 289 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 ANKK1Q8NFD2 765 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 OR4K5Q8NGD3 323 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 OR52J3Q8NH60 311 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 LILRB4Q8NHJ6 448 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 DNAJC9Q8WXX5 260 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 ROBO4Q8WZ75 1007 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 TMEM45BQ96B21 275 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 SDCCAG3Q96C92 435 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 PSD2Q9BQI7 771 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 RNF6Q9Y252 685 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 A0A0G2JNJ9 132 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 EFCAB9A8MZ26 197 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 M0R082 166 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 KPNA4O00629 521 aaPredicted RBP15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 MSTNO14793 375 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 TOXO94900 526 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 DIRAS1O95057 198 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 CCNB2O95067 398 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 NR2C1P13056 603 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 LIMS1P48059 325 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 COX10Q12887 443 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 CCNIQ14094 377 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 GUSBP1Q15486 140 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 ABHD12BQ7Z5M8 362 aaPredicted RBP15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 OAFQ86UD1 273 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 UEVLDQ8IX04 471 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 MARVELD2Q8N4S9 558 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 TMEM99Q8N816 258 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 ZNF417Q8TAU3 575 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 ADAD1Q96M93 576 aaKnown RBP15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 ZNF587Q96SQ5 575 aaPredicted RBP15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 USB1Q9BQ65 265 aaKnown RBP15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 FUZQ9BT04 418 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 SLC24A3Q9HC58 644 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 KCNJ16Q9NPI9 418 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 PLSCR4Q9NRQ2 329 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 Q9UFV3 132 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 PROCRQ9UNN8 238 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 MGAT4BQ9UQ53 548 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 RCE1Q9Y256 329 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 NOSIPQ9Y314 301 aaKnown RBP15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 ITPR2Q14571 2701 aa15.61■□□□□ 0.09
CLSTN3-210ENST00000540931 NPIPB13A6NJU9 1138 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 ZNF716A6NP11 495 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 NPIPB4C9JG80 1138 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 PLPP3O14495 311 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 MRPL33O75394 65 aaKnown RBP15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 CLDN14O95500 239 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 ADORA3P0DMS8 318 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 ANXA8P13928 327 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 AGTR1P30556 359 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 ADORA2A-AS1P86434 159 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 KPNB1Q14974 876 aaKnown RBP15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 ATP6AP1Q15904 470 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 MICAQ29983 383 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 C1QTNF12Q5T7M4 302 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 C1orf94Q6P1W5 598 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 BEND4Q6ZU67 534 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 GPAT4Q86UL3 456 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 CNEP1R1Q8N9A8 125 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 OR9K2Q8NGE7 335 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 GNPDA2Q8TDQ7 276 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 ABHD3Q8WU67 409 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 ZNF556Q9HAH1 456 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 PLEKHB1Q9UF11 243 aaPredicted RBP15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 ENOPH1Q9UHY7 261 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 HIF3AQ9Y2N7 669 aa15.6■□□□□ 0.09
CLSTN3-210ENST00000540931 TRBV4-1A0A0J9YWV2 114 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 A0A1W2PRG6 482 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 CENPBD1B2RD01 187 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 RNF13O43567 381 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 TSPAN19P0C672 248 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 AHCYP23526 432 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 FPR3P25089 353 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 KIR2DL2P43627 348 aaPredicted RBP15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 IL1RL1Q01638 556 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 EXOC3L2Q2M3D2 409 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 ZBED5Q49AG3 693 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 FAM205BPQ63HN1 556 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 SSX8Q7RTT4 187 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 SLC46A3Q7Z3Q1 461 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 HIPK1Q86Z02 1210 aa15.59■□□□□ 0.09
CLSTN3-210ENST00000540931 P3H2Q8IVL5 708 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms