RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ASPNQ9BXN1 380 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 OR10A4Q9H209 315 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 SLC7A10Q9NS82 523 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 NDE1Q9NXR1 346 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 UPB1Q9UBR1 384 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 MALT1Q9UDY8 824 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 RIMS3Q9UJD0 308 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 B3GALT5Q9Y2C3 310 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 CORINQ9Y5Q5 1042 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 SNX13Q9Y5W8 968 aa8.15□□□□□ -1.1
SNHG1-215ENST00000540904 CIB4A0PJX0 185 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 DEFB108AA8MXU0 73 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 SIAH2O43255 324 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 FZD7O75084 574 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 RAD51DO75771 328 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 KRT33AO76009 404 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 OR5F1O95221 314 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 GOSR1O95249 250 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 CH25HO95992 272 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 MT-ATP6P00846 226 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 IFNW1P05000 195 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 COX5AP20674 150 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 AHCYP23526 432 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 IFNA8P32881 189 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 MSX2P35548 267 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-215ENST00000540904 SELENOPP49908 381 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 CLDN17P56750 224 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 IFI44LQ53G44 452 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 NIPAL3Q6P499 406 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 CBLL1Q75N03 491 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 CDH24Q86UP0 819 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 EPHX4Q8IUS5 362 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 NKAIN4Q8IVV8 208 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 ZNF433Q8N7K0 673 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-215ENST00000540904 SCAIQ8N9R8 606 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 PFN4Q8NHR9 129 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 TMEM255BQ8WV15 326 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 GEMIN6Q8WXD5 167 aaKnown RBP8.14□□□□□ -1.11
SNHG1-215ENST00000540904 NSL1Q96IY1 281 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 HSH2DQ96JZ2 352 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 USB1Q9BQ65 265 aaKnown RBP8.14□□□□□ -1.11
SNHG1-215ENST00000540904 PRSS27Q9BQR3 290 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 ZNF426Q9BUY5 554 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 SLC19A3Q9BZV2 496 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 AMBRA1Q9C0C7 1298 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 POLR2J2Q9GZM3 115 aaKnown RBP8.14□□□□□ -1.11
SNHG1-215ENST00000540904 POLR2J3Q9H1A7 115 aaKnown RBP8.14□□□□□ -1.11
SNHG1-215ENST00000540904 SLCO5A1Q9H2Y9 848 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 LIME1Q9H400 295 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 NANSQ9NR45 359 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 MRPL39Q9NYK5 338 aaKnown RBP8.14□□□□□ -1.11
SNHG1-215ENST00000540904 TAS2R16Q9NYV7 291 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 B3GAT1Q9P2W7 334 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 RHCGQ9UBD6 479 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 RPS6KA6Q9UK32 745 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 NBPF19A0A087WUL8 3843 aa8.14□□□□□ -1.11
SNHG1-215ENST00000540904 LOC102725191A0A1B0GVB3 256 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-215ENST00000540904 A0A1W2PPR1 153 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 OR5H1A6NKK0 313 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 ENO4A6NNW6 628 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 B2RBV5 119 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 C11orf98E9PRG8 122 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 MS4A18H0YCH9 400 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 J3KTA2 159 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 PLPP3O14495 311 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 SERPINI2O75830 405 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 OR6A2O95222 327 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 HPRP00739 348 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 HIST1H2ABP04908 130 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 ITGA5P08648 1049 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 THRBP10828 461 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 UMPSP11172 480 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 HLA-DOBP13765 273 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 HSD17B1P14061 328 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 CDH2P19022 906 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-215ENST00000540904 RBM34P42696 430 aaKnown RBP8.13□□□□□ -1.11
SNHG1-215ENST00000540904 UGT2B15P54855 530 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 FOXG1P55316 489 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-215ENST00000540904 POU3F1Q03052 451 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-215ENST00000540904 LGALS3BPQ08380 585 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 PUDPQ08623 228 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 ST3GAL3Q11203 375 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 TAB1Q15750 504 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 ZNF74Q16587 644 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 MS4A18Q3C1V0 323 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 HIST3H2AQ7L7L0 130 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 UEVLDQ8IX04 471 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 LRRC17Q8N6Y2 441 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 POMGNT2Q8NAT1 580 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 RBM15BQ8NDT2 890 aaKnown RBP8.13□□□□□ -1.11
SNHG1-215ENST00000540904 ADPRHL1Q8NDY3 354 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 OR5J2Q8NH18 312 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 OR52N5Q8NH56 324 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 TMEM239Q8WW34 195 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 HSD17B8Q92506 261 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 HIST1H2ACQ93077 130 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 MUCL1Q96DR8 90 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 PLPPR2Q96GM1 343 aa8.13□□□□□ -1.11
SNHG1-215ENST00000540904 PRRC1Q96M27 445 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms