RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 CALML5Q9NZT1 146 aa14.12□□□□□ -0.15
TRIM65-203ENST00000540812 CRNNQ9UBG3 495 aaPredicted RBP14.12□□□□□ -0.15
TRIM65-203ENST00000540812 KCNS2Q9ULS6 477 aa14.12□□□□□ -0.15
TRIM65-203ENST00000540812 RASD1Q9Y272 281 aa14.12□□□□□ -0.15
TRIM65-203ENST00000540812 ARPC4-TTLL3A0A0A6YYG9 625 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 LOC100289279A0A1B0GTE1 492 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 FTCDNL1E5RQL4 147 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 NDUFS8O00217 210 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 VAMP5O95183 116 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 TGDSO95455 350 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 CELA3BP08861 270 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 OR4A8P0C604 315 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 NCF2P19878 526 aaPredicted RBP14.11□□□□□ -0.15
TRIM65-203ENST00000540812 CRISP3P54108 245 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 HOXC5Q00444 222 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 NAAAQ02083 359 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 LARS2Q15031 903 aaKnown RBP14.11□□□□□ -0.15
TRIM65-203ENST00000540812 PDCD4Q53EL6 469 aaKnown RBP14.11□□□□□ -0.15
TRIM65-203ENST00000540812 HSP90B2PQ58FF3 399 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 FAM166AQ6J272 317 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 ANKRD16Q6P6B7 361 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 MYPOPQ86VE0 399 aaPredicted RBP14.11□□□□□ -0.15
TRIM65-203ENST00000540812 VPS33AQ96AX1 596 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 PTDSS2Q9BVG9 487 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 TPT1P8Q9HAU6 139 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 SLCO1B3Q9NPD5 702 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 SEC14L4Q9UDX3 406 aa14.11□□□□□ -0.15
TRIM65-203ENST00000540812 LOC390937A0A1W2PQ73 354 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 B9A039 149 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 SLC22A3O75751 556 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 IGLV1-44P01699 117 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 CRYAAP02489 173 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 IL6P05231 212 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 NUDT7P0C024 238 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 PNMTP11086 282 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 APEHP13798 732 aaKnown RBP14.1□□□□□ -0.15
TRIM65-203ENST00000540812 SRD5A1P18405 259 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 CLDN17P56750 224 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 ROR2Q01974 943 aaKnown RBP14.1□□□□□ -0.15
TRIM65-203ENST00000540812 HGFACQ04756 655 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 EGR4Q05215 589 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 SLC9B1Q4ZJI4 515 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 FAM120AOSQ5T036 256 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 NXNQ6DKJ4 435 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 MAVSQ7Z434 540 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 OR9I1Q8NGQ6 314 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 MAGEE2Q8TD90 523 aaPredicted RBP14.1□□□□□ -0.15
TRIM65-203ENST00000540812 STK35Q8TDR2 534 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 SLC25A36Q96CQ1 311 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 SOX7Q9BT81 388 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 SPATA9Q9BWV2 254 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 LINC00470Q9BZP3 86 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 BPESC1Q9GZL8 116 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 PLK3Q9H4B4 646 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 PRDM4Q9UKN5 801 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 USH1CQ9Y6N9 552 aa14.1□□□□□ -0.15
TRIM65-203ENST00000540812 A0A096LPI6 279 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 OR6C65A6NJZ3 312 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 ZNF432O94892 652 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 AHSA1O95433 338 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 ANP32DO95626 131 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 ZCCHC18P0CG32 403 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 IDO1P14902 403 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 THBS2P35442 1172 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 RPS5P46782 204 aaKnown RBP14.09□□□□□ -0.15
TRIM65-203ENST00000540812 ARF1P84077 181 aaKnown RBP14.09□□□□□ -0.15
TRIM65-203ENST00000540812 EFNB3Q15768 340 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 C3orf36Q3SXR2 165 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 IQCCQ4KMZ1 466 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 EPGNQ6UW88 154 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 MFSD8Q8NHS3 518 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 KTI12Q96EK9 354 aaPredicted RBP14.09□□□□□ -0.15
TRIM65-203ENST00000540812 C19orf24Q9BVV8 132 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 RSPO3Q9BXY4 272 aaPredicted RBP14.09□□□□□ -0.15
TRIM65-203ENST00000540812 B3GAT1Q9P2W7 334 aa14.09□□□□□ -0.15
TRIM65-203ENST00000540812 A0A0G2JPF8 293 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 ZNF503-AS2A6NEH8 195 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 HNRNPCL2B2RXH8 293 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 HNRNPCL3B7ZW38 293 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 HNRNPCL1O60812 293 aaKnown RBP14.08□□□□□ -0.16
TRIM65-203ENST00000540812 PDE5AO76074 875 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 IGKV3-15P01624 115 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 HNRNPCL4P0DMR1 293 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 IDH3GP51553 393 aaPredicted RBP14.08□□□□□ -0.16
TRIM65-203ENST00000540812 ZSWIM7Q19AV6 140 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 ZNF311Q5JNZ3 666 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 ZCCHC24Q8N2G6 241 aaKnown RBP14.08□□□□□ -0.16
TRIM65-203ENST00000540812 OR4F15Q8NGB8 312 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 MAL2Q969L2 176 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 ZNF837Q96EG3 531 aaPredicted RBP14.08□□□□□ -0.16
TRIM65-203ENST00000540812 ITCHQ96J02 903 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 ZNF317Q96PQ6 595 aaPredicted RBP14.08□□□□□ -0.16
TRIM65-203ENST00000540812 OR52B2Q96RD2 323 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 GPR35Q9HC97 309 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 MYOZ1Q9NP98 299 aaPredicted RBP14.08□□□□□ -0.16
TRIM65-203ENST00000540812 ZIM2Q9NZV7 527 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 ZNF232Q9UNY5 417 aa14.08□□□□□ -0.16
TRIM65-203ENST00000540812 LRP5LA4QPB2 252 aa14.07□□□□□ -0.16
TRIM65-203ENST00000540812 hCG_2039718K7EN88 272 aa14.07□□□□□ -0.16
TRIM65-203ENST00000540812 FZD7O75084 574 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms