RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 SLCO5A1Q9H2Y9 848 aa13.25□□□□□ -0.29
UBE3B-212ENST00000540230 EFCAB1Q9HAE3 211 aa13.25□□□□□ -0.29
UBE3B-212ENST00000540230 PARPBPQ9NWS1 579 aa13.25□□□□□ -0.29
UBE3B-212ENST00000540230 UPB1Q9UBR1 384 aa13.25□□□□□ -0.29
UBE3B-212ENST00000540230 ALPK2Q86TB3 2170 aa13.25□□□□□ -0.29
UBE3B-212ENST00000540230 DSCAMO60469 2012 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 TRAPPC13A5PLN9 417 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 MS4A18H0YCH9 400 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 FUT4P22083 530 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 GSK3BP49841 420 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 CLDN17P56750 224 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 SLC25A3Q00325 362 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 PPA1Q15181 289 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 MS4A18Q3C1V0 323 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 TIMM23BQ5SRD1 257 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 NCMAPQ5T1S8 102 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 HACD2Q6Y1H2 254 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 DEF8Q6ZN54 512 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 H1FNTQ75WM6 255 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-212ENST00000540230 PIGWQ7Z7B1 504 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 WDFY1Q8IWB7 410 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 OR52N5Q8NH56 324 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 OXGR1Q96P68 337 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 ALKBH3Q96Q83 286 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-212ENST00000540230 EPYCQ99645 322 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 FOXC2Q99958 501 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 HOPXQ9BPY8 73 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-212ENST00000540230 ZNF426Q9BUY5 554 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 AMBRA1Q9C0C7 1298 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 CXXC4Q9H2H0 198 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 BAG5Q9UL15 447 aa13.24□□□□□ -0.29
UBE3B-212ENST00000540230 TEP1Q99973 2627 aaKnown RBP13.24□□□□□ -0.29
UBE3B-212ENST00000540230 DPRXA6NFQ7 191 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 KPNA4O00629 521 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-212ENST00000540230 TRAF3IP2O43734 574 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-212ENST00000540230 UPK3AO75631 287 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 ZNF43P17038 809 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 NR1H2P55055 460 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 BSPH1Q075Z2 132 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 PIN1Q13526 163 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-212ENST00000540230 ACKR1Q16570 336 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 DEFB113Q30KQ7 82 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 SPNS3Q6ZMD2 512 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 VTCN1Q7Z7D3 282 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 NKAIN4Q8IVV8 208 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 OR6S1Q8NH40 331 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 LILRB1Q8NHL6 650 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-212ENST00000540230 NEUROG1Q92886 237 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 MBD6Q96DN6 1003 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 CMTM5Q96DZ9 223 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 TPD52L3Q96J77 140 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 MUS81Q96NY9 551 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 ALG2Q9H553 416 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 ABCD2Q9UBJ2 740 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 B3GALT5Q9Y2C3 310 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 SLC25A15Q9Y619 301 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 CXCR6O00574 342 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 ZNF432O94892 652 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 NQO1P15559 274 aaKnown RBP13.23□□□□□ -0.29
UBE3B-212ENST00000540230 CDH2P19022 906 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-212ENST00000540230 MPGP29372 298 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 PRDX6P30041 224 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 PSME3P61289 254 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 IL1RL1Q01638 556 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 FOXD4Q12950 439 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-212ENST00000540230 NHLRC1Q6VVB1 395 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 C10orf53Q8N6V4 93 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 LRRC17Q8N6Y2 441 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 WDR31Q8NA23 367 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 POMGNT2Q8NAT1 580 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 ADPRHL1Q8NDY3 354 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 KBTBD8Q8NFY9 601 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 USB1Q9BQ65 265 aaKnown RBP13.23□□□□□ -0.29
UBE3B-212ENST00000540230 MEPEQ9NQ76 525 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-212ENST00000540230 MRPL39Q9NYK5 338 aaKnown RBP13.23□□□□□ -0.29
UBE3B-212ENST00000540230 SNX13Q9Y5W8 968 aa13.23□□□□□ -0.29
UBE3B-212ENST00000540230 MAP1AP78559 2803 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-212ENST00000540230 ITPR3Q14573 2671 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 CLOCKO15516 846 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 CH25HO95992 272 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 NCK1P16333 377 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 UGT2B15P54855 530 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 TAS2R41P59536 307 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 SELENOWP63302 87 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 ZNF74Q16587 644 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 ADAM5Q6NVV9 412 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 TTC33Q6PID6 262 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-212ENST00000540230 SCAIQ8N9R8 606 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 PFN4Q8NHR9 129 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 TMEM255BQ8WV15 326 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 AKAP1Q92667 903 aaKnown RBP eCLIP13.22□□□□□ -0.29
UBE3B-212ENST00000540230 MUCL1Q96DR8 90 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 ALPK1Q96QP1 1244 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 EMC6Q9BV81 110 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 C1QTNF6Q9BXI9 259 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 ASPNQ9BXN1 380 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 ARL8BQ9NVJ2 186 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 MED29Q9NX70 200 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 RCE1Q9Y256 329 aa13.22□□□□□ -0.29
UBE3B-212ENST00000540230 AP3M1Q9Y2T2 418 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms