RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 C12orf71A8MTZ7 269 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 RIPK2O43353 540 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 SURF6O75683 361 aaKnown RBP4.43□□□□□ -1.7
TRAV11-201ENST00000539512 TNFSF13O75888 250 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 TSPAN12O95859 305 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 KRT6AP02538 564 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 CHTF8P0CG12 524 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 PNMA6AP0CW24 399 aaPredicted RBP4.43□□□□□ -1.7
TRAV11-201ENST00000539512 MDKP21741 143 aaPredicted RBP4.43□□□□□ -1.7
TRAV11-201ENST00000539512 UBE2HP62256 183 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 ZNF763Q0D2J5 394 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 MRPL28Q13084 256 aaKnown RBP4.43□□□□□ -1.7
TRAV11-201ENST00000539512 GNMTQ14749 295 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 CYB5R2Q6BCY4 276 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 TIFABQ6ZNK6 161 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 RALGPS2Q86X27 583 aaPredicted RBP4.43□□□□□ -1.7
TRAV11-201ENST00000539512 OR6X1Q8NH79 312 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 FCRL1Q96LA6 429 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 PELOQ9BRX2 385 aaKnown RBP4.43□□□□□ -1.7
TRAV11-201ENST00000539512 HES7Q9BYE0 225 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 NXF3Q9H4D5 531 aaKnown RBP4.43□□□□□ -1.7
TRAV11-201ENST00000539512 QPCTLQ9NXS2 382 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 ERCC6Q03468 1493 aa4.43□□□□□ -1.7
TRAV11-201ENST00000539512 KANK1Q14678 1352 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 IGKV6D-21A0A0A0MT36 114 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 HSD17B6O14756 317 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 NBR2O15453 112 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 FAM189A1O60320 539 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 HSD17B2P37059 387 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 SCRN3Q0VDG4 424 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 CAPRIN1Q14444 709 aaKnown RBP4.42□□□□□ -1.7
TRAV11-201ENST00000539512 KDELC1Q6UW63 502 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 LRRC74BQ6ZQY2 392 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 MFSD6LQ8IWD5 586 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 STMN2Q93045 179 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.42□□□□□ -1.7
TRAV11-201ENST00000539512 GCOM2Q9BZD3 368 aaPredicted RBP4.42□□□□□ -1.7
TRAV11-201ENST00000539512 PPA2Q9H2U2 334 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 ZNF331Q9NQX6 463 aaPredicted RBP4.42□□□□□ -1.7
TRAV11-201ENST00000539512 PDS5BQ9NTI5 1447 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 MMP17Q9ULZ9 603 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 THSD7BQ9C0I4 1608 aa4.42□□□□□ -1.7
TRAV11-201ENST00000539512 SNTNA6NMZ2 147 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 ERLIN2O94905 339 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 LRRC10Q5BKY1 277 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 OR2A2Q6IF42 318 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 RFLNAQ6ZTI6 216 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 RUFY3Q7L099 469 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 DHDDSQ86SQ9 333 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 TMEM61Q8N0U2 210 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 ARIH2OSQ8N7S6 290 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 OR1L4Q8NGR5 311 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 OR1N2Q8NGR9 330 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 ACOT11Q8WXI4 607 aaPredicted RBP4.41□□□□□ -1.7
TRAV11-201ENST00000539512 OXGR1Q96P68 337 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 OR2M2Q96R28 347 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 TMEM246Q9BRR3 403 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 TRIM62Q9BVG3 475 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 NMRAL1Q9HBL8 299 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 NPTNQ9Y639 398 aa4.41□□□□□ -1.7
TRAV11-201ENST00000539512 TRBV6-6A0A0A6YYG2 114 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 FAM240BA0A1B0GVZ2 78 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 PANO1I0J062 215 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 TRAF3IP2O43734 574 aaPredicted RBP4.4□□□□□ -1.71
TRAV11-201ENST00000539512 B4GALT2O60909 372 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 MMP1P03956 469 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 CAPN1P07384 714 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 PSG2P11465 335 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 CRISP2P16562 243 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 CD1CP29017 333 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 OPRD1P41143 372 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 GYG1P46976 350 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 CDH4P55283 916 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 KRTAP12-2P59991 146 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 SEC61GP60059 68 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 HMGN5P82970 282 aaKnown RBP4.4□□□□□ -1.71
TRAV11-201ENST00000539512 LRRC31Q6UY01 552 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 ZNF429Q86V71 674 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 TRIM69Q86WT6 500 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 ZNF414Q96IQ9 312 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 MTMR9Q96QG7 549 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 ECSITQ9BQ95 431 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 CHRDL1Q9BU40 450 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 RIOK2Q9BVS4 552 aaKnown RBP4.4□□□□□ -1.71
TRAV11-201ENST00000539512 FN3KRPQ9HA64 309 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 ATRXP46100 2492 aa4.4□□□□□ -1.71
TRAV11-201ENST00000539512 A0A0G2JN53 185 aa4.39□□□□□ -1.71
TRAV11-201ENST00000539512 NKX2-6A6NCS4 301 aa4.39□□□□□ -1.71
TRAV11-201ENST00000539512 BTBD17A6NE02 478 aa4.39□□□□□ -1.71
TRAV11-201ENST00000539512 HAS3O00219 553 aa4.39□□□□□ -1.71
TRAV11-201ENST00000539512 FCMRO60667 390 aa4.39□□□□□ -1.71
TRAV11-201ENST00000539512 ALDOBP05062 364 aa4.39□□□□□ -1.71
TRAV11-201ENST00000539512 NCF2P19878 526 aaPredicted RBP4.39□□□□□ -1.71
TRAV11-201ENST00000539512 RORAP35398 523 aa4.39□□□□□ -1.71
TRAV11-201ENST00000539512 UCNP55089 124 aa4.39□□□□□ -1.71
TRAV11-201ENST00000539512 ACVR1Q04771 509 aa4.39□□□□□ -1.71
TRAV11-201ENST00000539512 PDIA2Q13087 525 aaKnown RBP4.39□□□□□ -1.71
TRAV11-201ENST00000539512 RFX4Q33E94 735 aa4.39□□□□□ -1.71
TRAV11-201ENST00000539512 ACP7Q6ZNF0 438 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms