RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TUBAL3A6NHL2 446 aa13.92□□□□□ -0.18
RPAIN-206ENST00000539417 ENO4A6NNW6 628 aa13.92□□□□□ -0.18
RPAIN-206ENST00000539417 C16orf97H3BN30 126 aa13.92□□□□□ -0.18
RPAIN-206ENST00000539417 GPR171O14626 319 aa13.92□□□□□ -0.18
RPAIN-206ENST00000539417 GTF2E2P29084 291 aaKnown RBP13.92□□□□□ -0.18
RPAIN-206ENST00000539417 SELENOPP49908 381 aa13.92□□□□□ -0.18
RPAIN-206ENST00000539417 SPATS1Q496A3 300 aa13.92□□□□□ -0.18
RPAIN-206ENST00000539417 TSPO2Q5TGU0 170 aa13.92□□□□□ -0.18
RPAIN-206ENST00000539417 KIF18BQ86Y91 864 aa13.92□□□□□ -0.18
RPAIN-206ENST00000539417 ZNF100Q8IYN0 542 aa13.92□□□□□ -0.18
RPAIN-206ENST00000539417 CCDC124Q96CT7 223 aaKnown RBP13.92□□□□□ -0.18
RPAIN-206ENST00000539417 LRRC46Q96FV0 321 aa13.92□□□□□ -0.18
RPAIN-206ENST00000539417 SLC7A10Q9NS82 523 aa13.92□□□□□ -0.18
RPAIN-206ENST00000539417 ACTR3BQ9P1U1 418 aa13.92□□□□□ -0.18
RPAIN-206ENST00000539417 PRPF19Q9UMS4 504 aaKnown RBP13.92□□□□□ -0.18
RPAIN-206ENST00000539417 RASD1Q9Y272 281 aa13.92□□□□□ -0.18
RPAIN-206ENST00000539417 CSMD1Q96PZ7 3565 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 SH3D21A4FU49 640 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 PLPP3O14495 311 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 ACOT8O14734 319 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 SIAH2O43255 324 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 TRAF3IP2O43734 574 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-206ENST00000539417 MRPL33O75394 65 aaKnown RBP13.91□□□□□ -0.18
RPAIN-206ENST00000539417 GMNNO75496 209 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 LYZL6O75951 148 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 MT-ND1P03886 318 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 THBDP07204 575 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 THRBP10828 461 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 IGHV1-2P23083 117 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 ST3GAL3Q11203 375 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 PMS2P3Q13401 168 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 TRIM25Q14258 630 aaKnown RBP13.91□□□□□ -0.18
RPAIN-206ENST00000539417 POU4F3Q15319 338 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 LINGO2Q7L985 606 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 AAED1Q7RTV5 226 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 STK32CQ86UX6 486 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 TMEM45BQ96B21 275 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 APH1AQ96BI3 265 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 TXNDC15Q96J42 360 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 OXGR1Q96P68 337 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 FNDC11Q9BVV2 318 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 NMNAT1Q9HAN9 279 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-206ENST00000539417 MRPL39Q9NYK5 338 aaKnown RBP13.91□□□□□ -0.18
RPAIN-206ENST00000539417 TAS2R5Q9NYW4 299 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 KCNN3Q9UGI6 736 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 B3GALT5Q9Y2C3 310 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 TESMINQ9Y4I5 508 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 LRBAP50851 2863 aa13.91□□□□□ -0.18
RPAIN-206ENST00000539417 ANKHD1Q8IWZ3 2542 aaKnown RBP13.91□□□□□ -0.18
RPAIN-206ENST00000539417 A0A087WUU8 490 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 GYG2O15488 501 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 ASAH2BP0C7U1 165 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 NQO1P15559 274 aaKnown RBP13.9□□□□□ -0.18
RPAIN-206ENST00000539417 MAKP20794 623 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 RBM34P42696 430 aaKnown RBP13.9□□□□□ -0.18
RPAIN-206ENST00000539417 CLDN17P56750 224 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 TLE4Q04727 773 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 SFRP5Q5T4F7 317 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 C9orf135Q5VTT2 229 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 FBXW9Q5XUX1 488 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 PGM2L1Q6PCE3 622 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 Q6ZT83 130 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 ARHGAP24Q8N264 748 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 ADPRHL1Q8NDY3 354 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 PIK3C3Q8NEB9 887 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 OR5J2Q8NH18 312 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 ZC3HAV1LQ96H79 300 aaKnown RBP13.9□□□□□ -0.18
RPAIN-206ENST00000539417 BTBD10Q9BSF8 475 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 ASPNQ9BXN1 380 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 CADM1Q9BY67 442 aaKnown RBP13.9□□□□□ -0.18
RPAIN-206ENST00000539417 SLC19A3Q9BZV2 496 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 CORINQ9Y5Q5 1042 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 PRR14LQ5THK1 2151 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 ABCA12Q86UK0 2595 aa13.9□□□□□ -0.18
RPAIN-206ENST00000539417 C11orf98E9PRG8 122 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 PDLIM1O00151 329 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 UPK3AO75631 287 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 OR7A10O76100 309 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 ZNF432O94892 652 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 VAMP5O95183 116 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 MT-ATP6P00846 226 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 ITGA5P08648 1049 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 EPXP11678 715 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 PSMB1P20618 241 aaKnown RBP13.89□□□□□ -0.19
RPAIN-206ENST00000539417 PCYT1AP49585 367 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 IL1RL1Q01638 556 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 FAPQ12884 760 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 TRAM2Q15035 370 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 SEC23BQ15437 767 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 PHYHD1Q5SRE7 291 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 LCN8Q6JVE9 175 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 NIPAL3Q6P499 406 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 NRMQ8IXM6 262 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 UBE2J2Q8N2K1 259 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 SCAIQ8N9R8 606 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 FAM222BQ8WU58 562 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 S100PBPQ96BU1 408 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 SGTBQ96EQ0 304 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 SEPHS2Q99611 448 aa13.89□□□□□ -0.19
RPAIN-206ENST00000539417 EMC6Q9BV81 110 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms