RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 SERTM1A2A2V5 107 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 B4DXG7 233 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 SEC14L5O43304 696 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ICOSLGO75144 302 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 KHDRBS3O75525 346 aaKnown RBP7.54□□□□□ -1.2
ABCA4-207ENST00000536513 OR6A2O95222 327 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 CHMP24386 653 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ELAVL4P26378 380 aaKnown RBP7.54□□□□□ -1.2
ABCA4-207ENST00000536513 CCKBRP32239 447 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 GRK6P43250 576 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 EIF1AXP47813 144 aaKnown RBP7.54□□□□□ -1.2
ABCA4-207ENST00000536513 TRA2BP62995 288 aaKnown RBP7.54□□□□□ -1.2
ABCA4-207ENST00000536513 KEAP1Q14145 624 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 TBCEQ15813 527 aaPredicted RBP7.54□□□□□ -1.2
ABCA4-207ENST00000536513 NTRK2Q16620 822 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 LINC00471Q8N535 108 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 OR10H4Q8NGA5 316 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 OR52L1Q8NGH7 329 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ST8SIA4Q92187 359 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 OR11A1Q9GZK7 315 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 FN3KQ9H479 309 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ZSCAN32Q9NX65 697 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 TAS2R7Q9NYW3 318 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 MED11Q9P086 117 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 C19orf53Q9UNZ5 99 aaPredicted RBP7.54□□□□□ -1.2
ABCA4-207ENST00000536513 LIPT1Q9Y234 373 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 RPL36Q9Y3U8 105 aaKnown RBP7.54□□□□□ -1.2
ABCA4-207ENST00000536513 PKDREJQ9NTG1 2253 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 SLC16A6O15403 523 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 OR2J2O76002 312 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 IGLV3-19P01714 112 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ARSBP15848 533 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 PSG6Q00889 435 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ZNF782Q6ZMW2 699 aaPredicted RBP7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ZNF595Q8IYB9 648 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ZNF619Q8N2I2 560 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 FUZQ9BT04 418 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 TSPAN10Q9H1Z9 355 aaPredicted RBP7.54□□□□□ -1.2
ABCA4-207ENST00000536513 SLC6A15Q9H2J7 730 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 PIGUQ9H490 435 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ZNF160Q9HCG1 818 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 C20orf141Q9NUB4 165 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 B3GNT2Q9NY97 397 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 REV1Q9UBZ9 1251 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 EPHA6Q9UF33 1036 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ABCA4P78363 2273 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 UBE2QL1A1L167 161 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 CXCR1P25024 350 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ITGA3P26006 1051 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 CAPZA2P47755 286 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 DUSP3P51452 185 aaPredicted RBP7.54□□□□□ -1.2
ABCA4-207ENST00000536513 CRISP1P54107 249 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 NRG3P56975 720 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 RRAS2P62070 204 aaPredicted RBP7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ERVK-25P63136 954 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 C17orf107Q6ZR85 190 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ENTHD1Q8IYW4 607 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 ZNF687Q8N1G0 1237 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 BCORP1Q8N888 145 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 SAMD12Q8N8I0 201 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 NT5CQ8TCD5 201 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 GATAD2BQ8WXI9 593 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 TMEM80Q96HE8 168 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 PDCD10Q9BUL8 212 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 C1QTNF6Q9BXI9 259 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 TMEM38AQ9H6F2 299 aa7.54□□□□□ -1.2
ABCA4-207ENST00000536513 MRPS18BQ9Y676 258 aaKnown RBP7.54□□□□□ -1.2
ABCA4-207ENST00000536513 MYO7BQ6PIF6 2116 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 MED13LQ71F56 2210 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 LOC105371267A0A1B0GV96 52 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 LRRTM2O43300 516 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 TNFSF14O43557 240 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 RAD1O60671 282 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 HPGDSO60760 199 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 ENTPD6O75354 484 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 OR5F1O95221 314 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 ZIC2O95409 532 aaPredicted RBP7.53□□□□□ -1.2
ABCA4-207ENST00000536513 PPP1R3DO95685 299 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 IGKV1D-16P01601 117 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 HOXB6P17509 224 aaKnown RBP7.53□□□□□ -1.2
ABCA4-207ENST00000536513 SPINK2P20155 84 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 UGT2B10P36537 528 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 ETV1P50549 477 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 TRAM2Q15035 370 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 B3GNTL1Q67FW5 361 aaPredicted RBP7.53□□□□□ -1.2
ABCA4-207ENST00000536513 PAQR6Q6TCH4 344 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 MAML2Q8IZL2 1156 aaPredicted RBP7.53□□□□□ -1.2
ABCA4-207ENST00000536513 SYT14Q8NB59 555 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 ZNF680Q8NEM1 530 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 SDR9C7Q8NEX9 313 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 TNFAIP8L1Q8WVP5 186 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 TM4SF19Q96DZ7 209 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 ELMOD3Q96FG2 381 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 GAL3ST1Q99999 423 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 CACNG6Q9BXT2 260 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 PLA2G12AQ9BZM1 189 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 LYRM4Q9HD34 91 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 IFT46Q9NQC8 304 aa7.53□□□□□ -1.2
ABCA4-207ENST00000536513 TMEFF2Q9UIK5 374 aaPredicted RBP7.53□□□□□ -1.2
ABCA4-207ENST00000536513 MED31Q9Y3C7 131 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms