RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 MRGPRX3Q96LB0 322 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 LRFN5Q96NI6 719 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 FCRL4Q96PJ5 515 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ZNF385AQ96PM9 386 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 STACQ99469 402 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 FAAP24Q9BTP7 215 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ACPTQ9BZG2 426 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 BHLHE41Q9C0J9 482 aaPredicted RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 SLC39A8Q9C0K1 460 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ZNF350Q9GZX5 532 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SYNPO2LQ9H987 977 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 RHOFQ9HBH0 211 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 TMEM248Q9NWD8 314 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 DDIT4Q9NX09 232 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SRPK3Q9UPE1 567 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SLC35A3Q9Y2D2 325 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 CARHSP1Q9Y2V2 147 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 RPL36Q9Y3U8 105 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 INSL6Q9Y581 213 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 UBIAD1Q9Y5Z9 338 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 COL6A3P12111 3177 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 TRDV1A0A1B0GX56 115 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 RNF222A6NCQ9 220 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 YJEFN3A6XGL0 299 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 MAGEB17A8MXT2 336 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 LRRN3E7EW58 273 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SOCS6O14544 535 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 OR1F1O43749 312 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SOCS5O75159 536 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 GLCEO94923 617 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 NFATC1O95644 943 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SERPINA5P05154 406 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 F13BP05160 661 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 CSN2P05814 226 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ERCC1P07992 297 aaPredicted RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 THBS1P07996 1170 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 RNH1P13489 461 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 NID1P14543 1247 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 HOXB9P17482 250 aaPredicted RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 SDC1P18827 310 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 MSX1P28360 303 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 RBMS1P29558 406 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 PTGER1P34995 402 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ATP6V1E1P36543 226 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 GPR15P49685 360 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 PCBP4P57723 403 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 PTSQ03393 145 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 PIN1Q13526 163 aaPredicted RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 ISXQ2M1V0 245 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 NKAIN1Q4KMZ8 207 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 C9orf64Q5T6V5 341 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 GPRIN1Q7Z2K8 1008 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 CEACAM19Q7Z692 300 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 PIANPQ8IYJ0 282 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 CMTM4Q8IZR5 234 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 C15orf54Q8N8G6 183 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 POGLUT1Q8NBL1 392 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 FBXO15Q8NCQ5 510 aaPredicted RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 TMEM104Q8NE00 496 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 C17orf47Q8NEP4 570 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 OR4D11Q8NGI4 311 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 LGALS14Q8TCE9 139 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SELENOMQ8WWX9 145 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ARSGQ96EG1 525 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ALKBH3Q96Q83 286 aaPredicted RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 SERINC2Q96SA4 455 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SMOQ99835 787 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 FAM83CQ9BQN1 747 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 POLR2J3Q9H1A7 115 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 SLC25A18Q9H1K4 315 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 LRRN3Q9H3W5 708 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 KCNK15Q9H427 330 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 RDH14Q9HBH5 336 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 GPATCH2Q9NW75 528 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 UXTQ9UBK9 157 aaPredicted RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 ZNF346Q9UL40 294 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 KCNIP3Q9Y2W7 256 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 DYRK1BQ9Y463 629 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 HS3ST3B1Q9Y662 390 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 PATJQ8NI35 1801 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 UNC80Q8N2C7 3258 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 A0A0G2JK05 382 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 TRBC2A0A5B9 178 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 RNASEK-C17orf49H0YIS7 233 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 AQP7O14520 342 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 GEMIN2O14893 280 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 TAPBPO15533 448 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HSPA12AO43301 675 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 DPM1O60762 260 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CLDN11O75508 207 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 AQP8O94778 261 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 GJB5O95377 273 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 AIFM1O95831 613 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 MT-ND4LP03901 98 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HEXAP06865 529 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 POU2F2P09086 479 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CXCL1P09341 107 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 UBBP0CG47 229 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 F3P13726 295 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CSF2RAP15509 400 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms