RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ERLIN1O75477 346 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 CLPTM1O96005 669 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 PLATP00750 562 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 CSTAP01040 98 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 IGHMP01871 453 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 HLA-HP01893 362 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 SBK3P0C264 359 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 FKBP2P26885 142 aaKnown RBP6.99□□□□□ -1.29
CLIP1-206ENST00000535290 CD80P33681 288 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 FRKP42685 505 aaPredicted RBP6.99□□□□□ -1.29
CLIP1-206ENST00000535290 CAPZA2P47755 286 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 P2RY4P51582 365 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 SH3BGRP55822 239 aaPredicted RBP6.99□□□□□ -1.29
CLIP1-206ENST00000535290 SEC61A1P61619 476 aaKnown RBP6.99□□□□□ -1.29
CLIP1-206ENST00000535290 GUCY2DQ02846 1103 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 PAX8Q06710 450 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF141Q15928 474 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 NKPD1Q17RQ9 610 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 MMEL1Q495T6 779 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 UNC50Q53HI1 259 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 GKAP1Q5VSY0 366 aaPredicted RBP6.99□□□□□ -1.29
CLIP1-206ENST00000535290 NOXRED1Q6NXP6 359 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 NIPAL3Q6P499 406 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 TMEM154Q6P9G4 183 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 EPHX4Q8IUS5 362 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 KLHL7Q8IXQ5 586 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 TMEM151AQ8N4L1 468 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 ZFP28Q8NHY6 868 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF563Q8TA94 476 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 ST7LQ8TDW4 575 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 ADAMTS15Q8TE58 950 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 CCL17Q92583 94 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF75AQ96N20 296 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF382Q96SR6 550 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 OSBPL9Q96SU4 736 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 MRI1Q9BV20 369 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 NMUR2Q9GZQ4 415 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 IQCGQ9H095 443 aaKnown RBP6.99□□□□□ -1.29
CLIP1-206ENST00000535290 NECAP2Q9NVZ3 263 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 B3GNT2Q9NY97 397 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 SH3BP4Q9P0V3 963 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 POLR3KQ9Y2Y1 108 aaPredicted RBP6.99□□□□□ -1.29
CLIP1-206ENST00000535290 SNX24Q9Y343 169 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 TMED7-TICAM2A0A0A6YYA0 188 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 LIPT2A6NK58 231 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 AQP7P3A6NL99 342 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 FCMRO60667 390 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 UGT2B17O75795 530 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 SUPT7LO94864 414 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF432O94892 652 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF14P17017 642 aaPredicted RBP6.98□□□□□ -1.29
CLIP1-206ENST00000535290 MAKP20794 623 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 PGM1P36871 562 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 FOXA1P55317 472 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 DR1Q01658 176 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 TEKQ02763 1124 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 COL10A1Q03692 680 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 PIGFQ07326 219 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 CEACAM7Q14002 265 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 OR7A5Q15622 319 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 GPR68Q15743 365 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 MAPK14Q16539 360 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 TSTQ16762 297 aaKnown RBP6.98□□□□□ -1.29
CLIP1-206ENST00000535290 HFEQ30201 348 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 TRMT5Q32P41 509 aaKnown RBP6.98□□□□□ -1.29
CLIP1-206ENST00000535290 PCGF3Q3KNV8 242 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 EMBQ6PCB8 327 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 BRD3OSQ6XYD6 125 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 CREB3L2Q70SY1 520 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 EIF3MQ7L2H7 374 aaKnown RBP6.98□□□□□ -1.29
CLIP1-206ENST00000535290 R3HCC1LQ7Z5L2 792 aaKnown RBP6.98□□□□□ -1.29
CLIP1-206ENST00000535290 ALDH16A1Q8IZ83 802 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 FAM71CQ8NEG0 241 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 SGCDQ92629 289 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 PPP1R14AQ96A00 147 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 PPCDCQ96CD2 204 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 SDF2Q99470 211 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 ACTRT3Q9BYD9 372 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 LINC00470Q9BZP3 86 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 PIF1Q9H611 641 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 ACSS3Q9H6R3 686 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 NPHS2Q9NP85 383 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 GPATCH2Q9NW75 528 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 NKIRAS2Q9NYR9 191 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 OSGIN1Q9UJX0 560 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 PCDHGB4Q9UN71 923 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 TMED7Q9Y3B3 224 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 JRKLQ9Y4A0 524 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 DSPPQ9NZW4 1301 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 RYR2Q92736 4967 aa6.98□□□□□ -1.29
CLIP1-206ENST00000535290 COL7A1Q02388 2944 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 TRAV40A0A0B4J280 105 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 AGAP5A6NIR3 686 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 RPL36A-HNRNPH2H7BZ11 118 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF208O43345 1280 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 TPD52L2O43399 206 aaKnown RBP6.97□□□□□ -1.29
CLIP1-206ENST00000535290 MPIG6BO95866 241 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 GSTA2P09210 222 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 MYZAPP0CAP1 466 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 IDH2P48735 452 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms