RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 YIF1AO95070 293 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 GABARAPO95166 117 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 NDUFA7O95182 113 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 APCSP02743 223 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 ALDOBP05062 364 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 BCHEP06276 602 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 KLK3P07288 261 aaPredicted RBP-0.04□□□□□ -2.42
COPB1-212ENST00000534771 ASGR1P07306 291 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 PFN1P07737 140 aaKnown RBP-0.04□□□□□ -2.42
COPB1-212ENST00000534771 CSF3P09919 207 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 IGHV3-43DP0DP04 118 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 UROSP10746 265 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 ANXA3P12429 323 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 SCG2P13521 617 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 CYP2B6P20813 491 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 BDNFP23560 247 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 CMA1P23946 247 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 COPB2P35606 906 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 BDKRB1P46663 353 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 CSNK1A1P48729 337 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 CDH4P55283 916 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 STX1BP61266 288 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 ARG2P78540 354 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 RAB40BQ12829 278 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 TSTA3Q13630 321 aaPredicted RBP-0.04□□□□□ -2.42
COPB1-212ENST00000534771 GINS1Q14691 196 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 CYTH1Q15438 398 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 PARP15Q460N3 678 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 ZBED5Q49AG3 693 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 AARDQ4LEZ3 155 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 PYDC2Q56P42 97 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 PRAMEF7Q5VXH5 474 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 PRMT9Q6P2P2 845 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 CES3Q6UWW8 571 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 LINC00696Q6ZRV3 163 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 NCCRP1Q6ZVX7 275 aaPredicted RBP-0.04□□□□□ -2.42
COPB1-212ENST00000534771 KCTD9Q7L273 389 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 LPCAT2Q7L5N7 544 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 STRADAQ7RTN6 431 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 TMEM135Q86UB9 458 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 GRAMD2AQ8IUY3 354 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 BATF2Q8N1L9 274 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 ANKRD20A12PQ8NF67 263 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 COQ8AQ8NI60 647 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 ZNF502Q8TBZ5 544 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 RNASE8Q8TDE3 154 aaKnown RBP-0.04□□□□□ -2.42
COPB1-212ENST00000534771 FGF11Q92914 225 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 SLC25A46Q96AG3 418 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 PAGE5Q96GU1 130 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 SEC22AQ96IW7 307 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 TSSK3Q96PN8 268 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 BAG1Q99933 345 aaPredicted RBP-0.04□□□□□ -2.42
COPB1-212ENST00000534771 SYNDIG1Q9H7V2 258 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 LPAR2Q9HBW0 351 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 NUDT15Q9NV35 164 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 NLE1Q9NVX2 485 aaPredicted RBP-0.04□□□□□ -2.42
COPB1-212ENST00000534771 DNAJB9Q9UBS3 223 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 STX8Q9UNK0 236 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 CACNA1DQ01668 2161 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 ZBED9Q6R2W3 1325 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 LTBP2Q14767 1821 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 IGHV3-74A0A0B4J1X5 117 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 ARHGEF35A5YM69 484 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 SDHAF1A6NFY7 115 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 A8MUI8 341 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 WASH3PC4AMC7 463 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 HIP1O00291 1037 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 BPY2O14599 106 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 RASGRF2O14827 1237 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 MRPS12O15235 138 aaKnown RBP-0.05□□□□□ -2.42
COPB1-212ENST00000534771 STX6O43752 255 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 DKC1O60832 514 aaKnown RBP eCLIP-0.05□□□□□ -2.42
COPB1-212ENST00000534771 STAMBPO95630 424 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 ANXA4P09525 319 aaPredicted RBP-0.05□□□□□ -2.42
COPB1-212ENST00000534771 ZNF806P0C7X5 589 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 ZNF735P0CB33 412 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 GKN3PP0CG01 181 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 CGB7P0DN87 165 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 FOLR1P15328 257 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 CSRP1P21291 193 aaKnown RBP-0.05□□□□□ -2.42
COPB1-212ENST00000534771 CALCRP30988 508 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 FGF9P31371 208 aaPredicted RBP-0.05□□□□□ -2.42
COPB1-212ENST00000534771 LEPP41159 167 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 FGF8P55075 233 aaPredicted RBP-0.05□□□□□ -2.42
COPB1-212ENST00000534771 SLC7A9P82251 487 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 MYBPC1Q00872 1141 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 IL1RL1Q01638 556 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 PPP1R8Q12972 351 aaKnown RBP-0.05□□□□□ -2.42
COPB1-212ENST00000534771 POU2AF1Q16633 256 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 HFEQ30201 348 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 BCL7AQ4VC05 210 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 SMUG1Q53HV7 270 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 GPRC6AQ5T6X5 926 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 PLBD1Q6P4A8 553 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 FAM159AQ6UWV7 190 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 WASH2PQ6VEQ5 465 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 SLC26A11Q86WA9 606 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 IQCA1Q86XH1 822 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 EFCAB13Q8IY85 973 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 MREGQ8N565 214 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms