RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 SPATS1Q496A3 300 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 FGD3Q5JSP0 725 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 C9orf135Q5VTT2 229 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 TMEM225Q6GV28 225 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 STAC2Q6ZMT1 411 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 CREB3L2Q70SY1 520 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 DHFR2Q86XF0 187 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 NRMQ8IXM6 262 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 ZNF100Q8IYN0 542 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 ZNF295-AS1Q8N0V1 137 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 ARHGAP24Q8N264 748 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 PIK3C3Q8NEB9 887 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 APH1AQ96BI3 265 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 ASB9Q96DX5 294 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 ALKBH3Q96Q83 286 aaPredicted RBP12.4□□□□□ -0.42
VPS11-205ENST00000534551 TACO1Q9BSH4 297 aaKnown RBP12.4□□□□□ -0.42
VPS11-205ENST00000534551 ASPNQ9BXN1 380 aa12.4□□□□□ -0.42
VPS11-205ENST00000534551 MRPL39Q9NYK5 338 aaKnown RBP12.4□□□□□ -0.42
VPS11-205ENST00000534551 A0A087WUU8 490 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 MS4A18H0YCH9 400 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 OR2T1O43869 369 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 DNAJC8O75937 253 aaPredicted RBP12.39□□□□□ -0.43
VPS11-205ENST00000534551 LYZL6O75951 148 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 OR7A10O76100 309 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 ADAP00813 363 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 H1F0P07305 194 aaKnown RBP12.39□□□□□ -0.43
VPS11-205ENST00000534551 ASAH2BP0C7U1 165 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 THRBP10828 461 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 IFI30P13284 250 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 MAKP20794 623 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 IGHV1-2P23083 117 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 RBM34P42696 430 aaKnown RBP12.39□□□□□ -0.43
VPS11-205ENST00000534551 GPR4P46093 362 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 CLDN17P56750 224 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 SORDQ00796 357 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 SPIBQ01892 262 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 POU3F1Q03052 451 aaPredicted RBP12.39□□□□□ -0.43
VPS11-205ENST00000534551 PMS2P3Q13401 168 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 TRAM2Q15035 370 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 MS4A18Q3C1V0 323 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 TSPO2Q5TGU0 170 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 NIPAL3Q6P499 406 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 PGM2L1Q6PCE3 622 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 H1FNTQ75WM6 255 aaPredicted RBP12.39□□□□□ -0.43
VPS11-205ENST00000534551 LINGO2Q7L985 606 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 AAED1Q7RTV5 226 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 STK32CQ86UX6 486 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 OR13C2Q8NGS9 318 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 OR5J2Q8NH18 312 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 OR6S1Q8NH40 331 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 OR52J3Q8NH60 311 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 SGTBQ96EQ0 304 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 ZC3HAV1LQ96H79 300 aaKnown RBP12.39□□□□□ -0.43
VPS11-205ENST00000534551 SPOCK3Q9BQ16 436 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 SF3B5Q9BWJ5 86 aaKnown RBP12.39□□□□□ -0.43
VPS11-205ENST00000534551 FKRPQ9H9S5 495 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 NMNAT1Q9HAN9 279 aaPredicted RBP12.39□□□□□ -0.43
VPS11-205ENST00000534551 NANSQ9NR45 359 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 SLC7A10Q9NS82 523 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 MED29Q9NX70 200 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 RASD1Q9Y272 281 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 B3GALT5Q9Y2C3 310 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 MED31Q9Y3C7 131 aa12.39□□□□□ -0.43
VPS11-205ENST00000534551 CSMD2Q7Z408 3487 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 SH3D21A4FU49 640 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 TUBAL3A6NHL2 446 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 PLPP3O14495 311 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 GSC2O15499 205 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 HNRNPRO43390 633 aaKnown RBP12.38□□□□□ -0.43
VPS11-205ENST00000534551 MRPL33O75394 65 aaKnown RBP12.38□□□□□ -0.43
VPS11-205ENST00000534551 MT-ATP6P00846 226 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 FABP3P05413 133 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 ADORA3P0DMS8 318 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 RHCEP18577 417 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 AHCYP23526 432 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 KIR2DL3P43628 341 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 PUDPQ08623 228 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 MELKQ14680 651 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 POU4F3Q15319 338 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 CARD17Q5XLA6 110 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 PODNL1Q6PEZ8 512 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 ZNF730Q6ZMV8 503 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 NANOGNBQ7Z5D8 188 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 CYP4Z1Q86W10 505 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 ZDHHC21Q8IVQ6 265 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 UEVLDQ8IX04 471 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 UBE2J2Q8N2K1 259 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 SCAIQ8N9R8 606 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 ADPRHL1Q8NDY3 354 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 MOSPD2Q8NHP6 518 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 SLC7A13Q8TCU3 470 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 TMEM45BQ96B21 275 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 LRRC46Q96FV0 321 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 TXNDC15Q96J42 360 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 DHRS1Q96LJ7 313 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 OXGR1Q96P68 337 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 PIP5K1AQ99755 562 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 EMC6Q9BV81 110 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 SLC19A3Q9BZV2 496 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 MUC13Q9H3R2 512 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 342 ms