RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 UPK3AO75631 287 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 WNT11O96014 354 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 HEXAP06865 529 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 TROVE2P10155 538 aaKnown RBP eCLIP9.15□□□□□ -0.94
CAPN1-225ENST00000533704 NQO1P15559 274 aaKnown RBP9.15□□□□□ -0.94
CAPN1-225ENST00000533704 PAX1P15863 534 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 HOXB4P17483 251 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-225ENST00000533704 GRPRP30550 384 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 UBE2NP61088 152 aaKnown RBP9.15□□□□□ -0.94
CAPN1-225ENST00000533704 TUBA1BP68363 451 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 TUBA4AP68366 448 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 OR1Q1Q15612 314 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 AGAP6Q5VW22 663 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 HMBOX1Q6NT76 420 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 ULK3Q6PHR2 472 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 B3GLCTQ6Y288 498 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 TUBA1AQ71U36 451 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 RANBP3LQ86VV4 465 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-225ENST00000533704 PTOV1Q86YD1 416 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 FBXL14Q8N1E6 418 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 C17orf78Q8N4C9 275 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 C1orf162Q8NEQ5 155 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-225ENST00000533704 BHLHE22Q8NFJ8 381 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-225ENST00000533704 VANGL1Q8TAA9 524 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-225ENST00000533704 ZNF417Q8TAU3 575 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 ZNF587Q96SQ5 575 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-225ENST00000533704 MCHR1Q99705 422 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 WFDC6Q9BQY6 131 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 SIKE1Q9BRV8 207 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 TRAF4Q9BUZ4 470 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-225ENST00000533704 ZNF385DQ9H6B1 395 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 GDF2Q9UK05 429 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-225ENST00000533704 ZANQ9Y493 2812 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 SONP18583 2426 aaKnown RBP9.14□□□□□ -0.95
CAPN1-225ENST00000533704 A0A096LPE4 126 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 A0A1W2PPZ6 126 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 RNF223E7ERA6 249 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 ATP6V1G2-DDX39BF2Z307 99 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 M0QX08 132 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 OVOL3O00110 214 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 OR2T1O43869 369 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 SLC43A1O75387 559 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 SERPINI2O75830 405 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 MFN2O95140 757 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 CD8AP01732 235 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 IGHV4-39P01824 125 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 VIMP08670 466 aaKnown RBP9.14□□□□□ -0.95
CAPN1-225ENST00000533704 PCSK6P29122 969 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 ACVR1BP36896 505 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 FABP6P51161 128 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 ROR2Q01974 943 aaKnown RBP9.14□□□□□ -0.95
CAPN1-225ENST00000533704 TNK1Q13470 666 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 TBRG1Q3YBR2 411 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 MMEL1Q495T6 779 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 FAM69AQ5T7M9 428 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 CARD17Q5XLA6 110 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 FAM91A1Q658Y4 838 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 C5orf46Q6UWT4 87 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 C6orf89Q6UWU4 347 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 GPR137CQ8N3F9 429 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 DPP10Q8N608 796 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 LSMEM1Q8N8F7 131 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 MAPK1IP1LQ8NDC0 245 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 OR1K1Q8NGR3 316 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 OR10A6Q8NH74 314 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 SLC26A7Q8TE54 656 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 STON2Q8WXE9 905 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 OXGR1Q96P68 337 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 EPYCQ99645 322 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 DHRS9Q9BPW9 319 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 KCNS3Q9BQ31 491 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 CACNG6Q9BXT2 260 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 AMBRA1Q9C0C7 1298 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 FKRPQ9H9S5 495 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 C12orf10Q9HB07 376 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 FGFR1OP2Q9NVK5 253 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 KLHL14Q9P2G3 628 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 GMEB1Q9Y692 573 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 VPS13CQ709C8 3753 aa9.14□□□□□ -0.95
CAPN1-225ENST00000533704 JMJD1CQ15652 2540 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 A0A087WUJ7 227 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 A0A0B4J2E0 115 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 A0A1B0GX12 115 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 OR6C65A6NJZ3 312 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 CPSF4LA6NMK7 179 aaKnown RBP9.13□□□□□ -0.95
CAPN1-225ENST00000533704 LRRN3E7EW58 273 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 AKAP8O43823 692 aaKnown RBP9.13□□□□□ -0.95
CAPN1-225ENST00000533704 SSX4O60224 188 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 TPST2O60704 377 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 TTKP33981 857 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 ARFIP2P53365 341 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 CDH12P55289 794 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 RBBP4Q09028 425 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 PMS2P3Q13401 168 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 TRMT5Q32P41 509 aaKnown RBP9.13□□□□□ -0.95
CAPN1-225ENST00000533704 METTL21CQ5VZV1 264 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 H1FNTQ75WM6 255 aaPredicted RBP9.13□□□□□ -0.95
CAPN1-225ENST00000533704 LINGO2Q7L985 606 aa9.13□□□□□ -0.95
CAPN1-225ENST00000533704 NET1Q7Z628 596 aaPredicted RBP9.13□□□□□ -0.95
CAPN1-225ENST00000533704 DTX2Q86UW9 622 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms