RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 ARL5AQ9Y689 179 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 A2ML1A8K2U0 1454 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 ASTN1O14525 1302 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 PLCH1Q4KWH8 1693 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 PTPRMP28827 1452 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 ECM29Q5VYK3 1845 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 A0A087X0T9 212 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 TGIF2-C20orf24A0A0A6YYL0 155 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 TRAV39A0A0B4J263 110 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 ZCWPW2A0A1B0GU75 182 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 A0A1W2PQL4 384 aaPredicted RBP5.03□□□□□ -1.6
CD44-236ENST00000533222 A4D1N5 150 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR2A25A4D2G3 310 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR6C68A6NDL8 312 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 MYO1GB0I1T2 1018 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR11H12B2RN74 326 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 DSCR3O14972 297 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 AIREO43918 545 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 CDC40O60508 579 aaKnown RBP eCLIP5.03□□□□□ -1.6
CD44-236ENST00000533222 WDR1O75083 606 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 SH3BGRLO75368 114 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 TULP3O75386 442 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 STBD1O95210 358 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 CH25HO95992 272 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 IGF2P01344 180 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 IGHG4P01861 327 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 THY1P04216 161 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 BPGMP07738 259 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 SULT1A3P0DMM9 295 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 SULT1A4P0DMN0 295 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 CYP4B1P13584 511 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 UCHL3P15374 230 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 CCND3P30281 292 aaPredicted RBP5.03□□□□□ -1.6
CD44-236ENST00000533222 HOXA13P31271 388 aaPredicted RBP5.03□□□□□ -1.6
CD44-236ENST00000533222 OR3A1P47881 315 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 ZP1P60852 638 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 RPL23AP62750 156 aaKnown RBP5.03□□□□□ -1.6
CD44-236ENST00000533222 SLC35A2P78381 396 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 MS4A2Q01362 244 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 MYL7Q01449 175 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 DEFA5Q01523 94 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 FPGSQ05932 587 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 PIGFQ07326 219 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 SLC10A7Q0GE19 358 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 BST1Q10588 318 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 DAG1Q14118 895 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 PTPRCAPQ14761 206 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 SLC9A3R2Q15599 337 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR4D1Q15615 310 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 ZXDCQ2QGD7 858 aaPredicted RBP5.03□□□□□ -1.6
CD44-236ENST00000533222 SMIM21Q3B7S5 101 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 UNC50Q53HI1 259 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 BEX5Q5H9J7 111 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 FAM74A1Q5RGS3 127 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 PLEKHS1Q5SXH7 462 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 DCST1Q5T197 706 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 TMEM244Q5VVB8 128 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 H3F3CQ6NXT2 135 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 C8orf82Q6P1X6 216 aaPredicted RBP5.03□□□□□ -1.6
CD44-236ENST00000533222 MFSD7Q6UXD7 560 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 TMPRSS11AQ6ZMR5 421 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 ZNF836Q6ZNA1 936 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 LANCL3Q6ZV70 420 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 CYS1Q717R9 158 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 LINGO2Q7L985 606 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 YRDCQ86U90 279 aaKnown RBP5.03□□□□□ -1.6
CD44-236ENST00000533222 CPOQ8IVL8 374 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 C9orf40Q8IXQ3 194 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 SELENOHQ8IZQ5 122 aaKnown RBP5.03□□□□□ -1.6
CD44-236ENST00000533222 ZBTB2Q8N680 514 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 SAMD12Q8N8I0 201 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 UBAC2Q8NBM4 344 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 PXT1Q8NFP0 134 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 BEST4Q8NFU0 473 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR11H1Q8NG94 326 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR4F15Q8NGB8 312 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR4F6Q8NGB9 312 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR9Q1Q8NGQ5 310 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR13C9Q8NGT0 318 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR6K3Q8NGY3 331 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR11H2Q8NH07 326 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR5W2Q8NH69 310 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR4S2Q8NH73 311 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 NUBPLQ8TB37 319 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 PIGXQ8TBF5 258 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 CD99L2Q8TCZ2 262 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 MAPK15Q8TD08 544 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 WFIKKN2Q8TEU8 576 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 ASB5Q8WWX0 329 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 RLN3Q8WXF3 142 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 TMEM234Q8WY98 164 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 ERGIC1Q969X5 290 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 LENG9Q96B70 501 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 TMEM159Q96B96 161 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 APIPQ96GX9 242 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 MSLNLQ96KJ4 702 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 NEDD4LQ96PU5 975 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 OR5B2Q96R09 309 aa5.03□□□□□ -1.6
CD44-236ENST00000533222 ZNF382Q96SR6 550 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms