RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 HMGA2P52926 109 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 CDH12P55289 794 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 GFRA1P56159 465 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 DSCR9P59020 149 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 SPIBQ01892 262 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 PLAURQ03405 335 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 LOXL1Q08397 574 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 PIN1Q13526 163 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 GANABQ14697 944 aaKnown RBP10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 NDUFAF6Q330K2 333 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 PPP4R4Q6NUP7 873 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 SLC30A6Q6NXT4 461 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 TBPL2Q6SJ96 375 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 STK32CQ86UX6 486 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 TSPYL5Q86VY4 417 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 SVOPLQ8N434 492 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 GALNT4Q8N4A0 578 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 CBR4Q8N4T8 237 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 ZNF610Q8N9Z0 462 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 GATSQ8NAP1 163 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 PIK3C3Q8NEB9 887 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 OR52J3Q8NH60 311 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 SGMS2Q8NHU3 365 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 PHOSPHO1Q8TCT1 267 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 SMAP2Q8WU79 429 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 TMCO6Q96DC7 493 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 ZMYND19Q96E35 227 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 NRBF2Q96F24 287 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 C9orf16Q9BUW7 83 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 ADAM19Q9H013 955 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 METTL7AQ9H8H3 244 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 NMNAT1Q9HAN9 279 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 FANCFQ9NPI8 374 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 A4GNTQ9UNA3 340 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 PROCRQ9UNN8 238 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 SLC35A3Q9Y2D2 325 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 MAGED1Q9Y5V3 778 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 ROS1P08922 2347 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 A0A1W2PQD3 144 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 CPSF4LA6NMK7 179 aaKnown RBP10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 ALG1L2C9J202 215 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 ADAMDEC1O15204 470 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 LMX1BO60663 402 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 GADD45GO95257 159 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 H1F0P07305 194 aaKnown RBP10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 UBTFL6P0CB48 400 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 ZNF26P17031 533 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 HNF1AP20823 631 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 PRKACGP22612 351 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 ACAA2P42765 397 aaKnown RBP10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 STARP49675 285 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 CLK3P49761 638 aaKnown RBP10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 CLDN18P56856 261 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 SMIM11AP58511 58 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 SIRPAP78324 504 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 CD226Q15762 336 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 BCL2A1Q16548 175 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 ENTPD8Q5MY95 495 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 OTUD3Q5T2D3 398 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 TMEM81Q6P7N7 255 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 SHQ1Q6PI26 577 aaKnown RBP10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 ZDHHC13Q8IUH4 622 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 EPHX4Q8IUS5 362 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 ZNF440Q8IYI8 595 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 HS3ST5Q8IZT8 346 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 OR4C15Q8NGM1 316 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 SLC35B4Q969S0 331 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 EPYCQ99645 322 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 FNDC11Q9BVV2 318 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 TBL1XR1Q9BZK7 514 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 RTN4RQ9BZR6 473 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 LAT2Q9GZY6 243 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 CTPS2Q9NRF8 586 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 TAS2R10Q9NYW0 307 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 CARD8Q9Y2G2 431 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 RNF115Q9Y4L5 304 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 LYVE1Q9Y5Y7 322 aa10.05□□□□□ -0.8
TRAPPC4-213ENST00000533149 IGHV4-30-2A0A087WSY4 118 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 A0A096LNT2 108 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 SOCS2O14508 198 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 ZNF264O43296 627 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 NDUFB5O43674 189 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 SCO2O43819 266 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 FMO6PO60774 539 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 OR5F1O95221 314 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 ANGPTL1O95841 491 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 UBL4AP11441 157 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 HTR2AP28223 471 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 IFNA8P32881 189 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 EVI2BP34910 448 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 RYKP34925 604 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 LIMS1P48059 325 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 ARHGDIAP52565 204 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 TAS2R41P59536 307 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 EPS8Q12929 822 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 SNTA1Q13424 505 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 LAPTM4AQ15012 233 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 OR1Q1Q15612 314 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 EXOC3L2Q2M3D2 409 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 IZUMO2Q6UXV1 221 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms