RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ZNF813Q6ZN06 617 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 ANKRD13BQ86YJ7 626 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 GTPBP8Q8N3Z3 284 aaPredicted RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 THOC3Q96J01 351 aaKnown RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 CMSS1Q9BQ75 279 aaKnown RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 RPP25Q9BUL9 199 aaKnown RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 MUTYHQ9UIF7 546 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 ZNF281Q9Y2X9 895 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 MAP1BP46821 2468 aaKnown RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 ZNF705EA8MWA4 302 aaPredicted RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 MCRIP1C9JLW8 97 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 RAB40ALP0C0E4 278 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 METAP1P53582 386 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 SPOCK1Q08629 439 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 SERPINA12Q8IW75 414 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 BRIX1Q8TDN6 353 aaKnown RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 RAB40AQ8WXH6 277 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 NUBP2Q9Y5Y2 271 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 GAPDHSO14556 408 aaPredicted RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 ETV5P41161 510 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 HACD4Q5VWC8 232 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 ETFBKMTQ8IXQ9 262 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 P2RY12Q9H244 342 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 C12orf49Q9H741 205 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 A0A1W2PPH5 198 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 A8MVM7 634 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 GOSR2O14653 212 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 OR7C1O76099 320 aaPredicted RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 GASTP01350 101 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 IGLV3-27P01718 113 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 TAS2R46P59540 309 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 SPEM1Q8N4L4 309 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 B3GAT1Q9P2W7 334 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 P2RX6O15547 441 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 PRKNO60260 465 aaPredicted RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 EIF4E2O60573 245 aaKnown RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 CD53P19397 219 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 RRAS2P62070 204 aaPredicted RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 B3GLCTQ6Y288 498 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 CYP4V2Q6ZWL3 525 aaPredicted RBP13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 OR14K1Q8NGZ2 314 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 KIF25Q9UIL4 384 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 USP54Q70EL1 1684 aa13.67□□□□□ -0.22
PCDHA9-202ENST00000532602 TMEM212A6NML5 194 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 MTCP1P56278 107 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 OR4F15Q8NGB8 312 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 OR56B1Q8NGI3 324 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 TAAR8Q969N4 342 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 TCRBV3S1A0A5B6 114 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 PRRG2O14669 202 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 CXADRP78310 365 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 MBOAT2Q6ZWT7 520 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 Q7L0L9 218 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 SIMC1Q8NDZ2 872 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 AP1S3Q96PC3 154 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 DECR2Q9NUI1 292 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 GNG12Q9UBI6 72 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 LRRC30A6NM36 301 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 ZNF593O00488 134 aaPredicted RBP13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 TSPAN15O95858 294 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 TAS2R19P59542 299 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 MLLT11Q13015 90 aaPredicted RBP13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 Q6ZNB5 142 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 NRG4Q8WWG1 115 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 NKX6-3A6NJ46 265 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 F5H5P2 479 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 CD1CP29017 333 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 ACTBL2Q562R1 376 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 TMEM196Q5HYL7 178 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 MAVSQ7Z434 540 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 TMIGD2Q96BF3 282 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 NEURL3Q96EH8 262 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 ALG12Q9BV10 488 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 CACNG2Q9Y698 323 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 CA5AP35218 305 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 DLSTP36957 453 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 RPS23P62266 143 aaKnown RBP13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 DPTQ07507 201 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 FAM198BQ6UWH4 519 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 Q6ZSR9 355 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 IL21Q9HBE4 155 aa13.66□□□□□ -0.22
PCDHA9-202ENST00000532602 CEBPZOSA8MTT3 80 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 PLRG1O43660 514 aaKnown RBP13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 OR2T7P0C7T2 308 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 BIDP55957 195 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 NUMA1Q14980 2115 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 FAM109BQ6ICB4 259 aaPredicted RBP13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 METAP1DQ6UB28 335 aaPredicted RBP13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 OR2T27Q8NH04 317 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 DCUN1D4Q92564 292 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 MUL1Q969V5 352 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 GCM1Q9NP62 436 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 TRAPPC2LQ9UL33 140 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 A6NIN4 97 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 ARGFXA6NJG6 315 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 PIP5K1CO60331 668 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 SF3A2Q15428 464 aaKnown RBP13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 NPSR1Q6W5P4 371 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 NDUFAF7Q7L592 441 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms