RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 WFDC11Q8NEX6 87 aa13.63□□□□□ -0.23
CTSB-225ENST00000532409 RP9Q8TA86 221 aaKnown RBP13.63□□□□□ -0.23
CTSB-225ENST00000532409 ADAMTS16Q8TE57 1224 aa13.63□□□□□ -0.23
CTSB-225ENST00000532409 AKAP1Q92667 903 aaKnown RBP eCLIP13.63□□□□□ -0.23
CTSB-225ENST00000532409 ALKBH3Q96Q83 286 aaPredicted RBP13.63□□□□□ -0.23
CTSB-225ENST00000532409 CCL19Q99731 98 aa13.63□□□□□ -0.23
CTSB-225ENST00000532409 SLCO5A1Q9H2Y9 848 aa13.63□□□□□ -0.23
CTSB-225ENST00000532409 RASD1Q9Y272 281 aa13.63□□□□□ -0.23
CTSB-225ENST00000532409 SH3GLB1Q9Y371 365 aa13.63□□□□□ -0.23
CTSB-225ENST00000532409 RNF115Q9Y4L5 304 aa13.63□□□□□ -0.23
CTSB-225ENST00000532409 SLC25A15Q9Y619 301 aa13.63□□□□□ -0.23
CTSB-225ENST00000532409 KPNA4O00629 521 aaPredicted RBP13.62□□□□□ -0.23
CTSB-225ENST00000532409 HS3ST1O14792 307 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 FMO6PO60774 539 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 CCDC22O60826 627 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 CD3EP07766 207 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 HLA-DOBP13765 273 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 OR1E2P47887 323 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 ZNF83P51522 516 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 IL1RL1Q01638 556 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 SPOCK1Q08629 439 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 FOXD4Q12950 439 aaPredicted RBP13.62□□□□□ -0.23
CTSB-225ENST00000532409 LRRC23Q53EV4 343 aaPredicted RBP13.62□□□□□ -0.23
CTSB-225ENST00000532409 H1FNTQ75WM6 255 aaPredicted RBP13.62□□□□□ -0.23
CTSB-225ENST00000532409 WDFY1Q8IWB7 410 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 SLC15A3Q8IY34 581 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 C10orf53Q8N6V4 93 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 OR2T12Q8NG77 320 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 MUCL1Q96DR8 90 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 MUS81Q96NY9 551 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 MYLK2Q9H1R3 596 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 BEX4Q9NWD9 120 aaPredicted RBP13.62□□□□□ -0.23
CTSB-225ENST00000532409 SLC7A7Q9UM01 511 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 PLCE1Q9P212 2302 aa13.62□□□□□ -0.23
CTSB-225ENST00000532409 MS4A18H0YCH9 400 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 NME4O00746 187 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 CHP2O43745 196 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 OR2T1O43869 369 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 VAMP5O95183 116 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 NQO1P15559 274 aaKnown RBP13.61□□□□□ -0.23
CTSB-225ENST00000532409 MPGP29372 298 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 SLC7A2P52569 658 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 VEZF1Q14119 521 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 MS4A18Q3C1V0 323 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 HIKESHIQ53FT3 197 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 CYBRD1Q53TN4 286 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 SWT1Q5T5J6 900 aaKnown RBP13.61□□□□□ -0.23
CTSB-225ENST00000532409 ERICH5Q6P6B1 374 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 C5orf46Q6UWT4 87 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 LINC00114Q6XXX2 140 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 DEF8Q6ZN54 512 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 C20orf204Q6ZNR8 217 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 TGIF2LYQ8IUE0 185 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 MICU2Q8IYU8 434 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 IGFBPL1Q8WX77 278 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 PROX1Q92786 737 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 PERPQ96FX8 193 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 OXGR1Q96P68 337 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 TMEM43Q9BTV4 400 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 AMBRA1Q9C0C7 1298 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 ESRP2Q9H6T0 727 aaKnown RBP13.61□□□□□ -0.23
CTSB-225ENST00000532409 EVA1AQ9H8M9 152 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 NGBQ9NPG2 151 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 B3GALT5Q9Y2C3 310 aa13.61□□□□□ -0.23
CTSB-225ENST00000532409 TRAPPC13A5PLN9 417 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 TRAF3IP2O43734 574 aaPredicted RBP13.6□□□□□ -0.23
CTSB-225ENST00000532409 SNX3O60493 162 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 KRT33AO76009 404 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 ZNF432O94892 652 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 ZNF43P17038 809 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 FUT4P22083 530 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 KDELR2P33947 212 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 NUDT2P50583 147 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 GNGT1P63211 74 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 LIPEQ05469 1076 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 C1DQ13901 141 aaKnown RBP13.6□□□□□ -0.23
CTSB-225ENST00000532409 C8orf82Q6P1X6 216 aaPredicted RBP13.6□□□□□ -0.23
CTSB-225ENST00000532409 P2RY8Q86VZ1 359 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 LRRC17Q8N6Y2 441 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 POMGNT2Q8NAT1 580 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 SLC41A3Q96GZ6 507 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 TXNDC15Q96J42 360 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 TPD52L3Q96J77 140 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 EPYCQ99645 322 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 USB1Q9BQ65 265 aaKnown RBP13.6□□□□□ -0.23
CTSB-225ENST00000532409 PRSS27Q9BQR3 290 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 EMC6Q9BV81 110 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 PCDHAC1Q9H158 963 aa13.6□□□□□ -0.23
CTSB-225ENST00000532409 ELOVL7A1L3X0 281 aa13.59□□□□□ -0.23
CTSB-225ENST00000532409 GMNCA6NCL1 334 aa13.59□□□□□ -0.23
CTSB-225ENST00000532409 SHISA9B4DS77 424 aa13.59□□□□□ -0.23
CTSB-225ENST00000532409 M0R1B8 84 aa13.59□□□□□ -0.23
CTSB-225ENST00000532409 ABCD4O14678 606 aa13.59□□□□□ -0.23
CTSB-225ENST00000532409 SMPD2O60906 423 aa13.59□□□□□ -0.23
CTSB-225ENST00000532409 SERPINI2O75830 405 aa13.59□□□□□ -0.23
CTSB-225ENST00000532409 CH25HO95992 272 aa13.59□□□□□ -0.23
CTSB-225ENST00000532409 SOD3P08294 240 aa13.59□□□□□ -0.23
CTSB-225ENST00000532409 HOXC12P31275 282 aa13.59□□□□□ -0.23
CTSB-225ENST00000532409 NKX6-1P78426 367 aaPredicted RBP13.59□□□□□ -0.23
CTSB-225ENST00000532409 PMS2P3Q13401 168 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms