RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 RETREG3Q86VR2 466 aa16.5■□□□□ 0.23
PTP4A2-214ENST00000532289 LRP11Q86VZ4 500 aa16.5■□□□□ 0.23
PTP4A2-214ENST00000532289 GSPT2Q8IYD1 628 aaKnown RBP16.5■□□□□ 0.23
PTP4A2-214ENST00000532289 FAM110DQ8TAY7 271 aaPredicted RBP16.5■□□□□ 0.23
PTP4A2-214ENST00000532289 ANP32BQ92688 251 aaKnown RBP16.5■□□□□ 0.23
PTP4A2-214ENST00000532289 NAA11Q9BSU3 229 aaPredicted RBP16.5■□□□□ 0.23
PTP4A2-214ENST00000532289 CRLF2Q9HC73 371 aa16.5■□□□□ 0.23
PTP4A2-214ENST00000532289 MYEF2Q9P2K5 600 aaKnown RBP16.5■□□□□ 0.23
PTP4A2-214ENST00000532289 PSMC3IPQ9P2W1 217 aaPredicted RBP16.5■□□□□ 0.23
PTP4A2-214ENST00000532289 CDC14BO60729 498 aa16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 C6orf47O95873 294 aa16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 NGFP01138 241 aa16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 NAT2P11245 290 aa16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 ARR3P36575 388 aa16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 HLXQ14774 488 aaPredicted RBP16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 ATP6AP1LQ52LC2 224 aa16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 LIPMQ5VYY2 423 aa16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 DDIASQ8IXT1 998 aa16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 OR9K2Q8NGE7 335 aa16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 RAB8BQ92930 207 aa16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 ALKBH3Q96Q83 286 aaPredicted RBP16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 TUBB1Q9H4B7 451 aa16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 TBK1Q9UHD2 729 aa16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 WIPI2Q9Y4P8 454 aa16.49■□□□□ 0.23
PTP4A2-214ENST00000532289 CLPSL1A2RUU4 121 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 ZNF503-AS2A6NEH8 195 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 FAM181BA6NEQ2 426 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 PLIN3O60664 434 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 LYPLA1O75608 230 aaPredicted RBP16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 IMPDH2P12268 514 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 MATN1P21941 496 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 ECHS1P30084 290 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 MAGEB1P43366 347 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 RELBQ01201 579 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 NPRL3Q12980 569 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 GRINAQ7Z429 371 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 OR5D16Q8NGK9 328 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 PPP3R2Q96LZ3 170 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 MKLN1Q9UL63 735 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 SLC35A3Q9Y2D2 325 aa16.48■□□□□ 0.23
PTP4A2-214ENST00000532289 TMEM229AB2RXF0 380 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 RIPK2O43353 540 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 FCMRO60667 390 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 UGT2B17O75795 530 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 NDUFA7O95182 113 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 RYKP34925 604 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 GLRXP35754 106 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 RAD52P43351 418 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 MMEL1Q495T6 779 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 PAQR6Q6TCH4 344 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 MRAPQ8TCY5 172 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 OIT3Q8WWZ8 545 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 PMM1Q92871 262 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 COQ8BQ96D53 544 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 SF3B5Q9BWJ5 86 aaKnown RBP16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 PIF1Q9H611 641 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 EXD2Q9NVH0 621 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 KCNE5Q9UJ90 142 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 KLHL21Q9UJP4 597 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 DNAJC15Q9Y5T4 150 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 AUP1Q9Y679 476 aa16.47■□□□□ 0.23
PTP4A2-214ENST00000532289 PLXNB1O43157 2135 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 LOC100653049A0A140TA62 436 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 A0A1W2PPM1 405 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 KRT34O76011 436 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 GPANK1O95872 356 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 SOAT1P35610 550 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 PGM1P36871 562 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 CRYBB2P43320 205 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 HTR3AP46098 478 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 MTNR1AP48039 350 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 SELENOPP49908 381 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 SH3BGRP55822 239 aaPredicted RBP16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 LOXL3P58215 753 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 FAM189A2Q15884 450 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 WHAMMP3Q1A5X7 153 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 ARHGAP11BQ3KRB8 267 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 KANK2Q63ZY3 851 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 C16orf62Q7Z3J2 963 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 C6orf120Q7Z4R8 191 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 MDP1Q86V88 176 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 OR5AK3PQ8NH89 298 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 MS4A7Q9GZW8 240 aaPredicted RBP16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 MMP26Q9NRE1 261 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 C1RLQ9NZP8 487 aa16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 LEF1Q9UJU2 399 aaPredicted RBP16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 SOX21Q9Y651 276 aaPredicted RBP16.46■□□□□ 0.23
PTP4A2-214ENST00000532289 TRAF3IP2O43734 574 aaPredicted RBP16.45■□□□□ 0.22
PTP4A2-214ENST00000532289 UPK3AO75631 287 aa16.45■□□□□ 0.22
PTP4A2-214ENST00000532289 FGF4P08620 206 aa16.45■□□□□ 0.22
PTP4A2-214ENST00000532289 CCNA2P20248 432 aa16.45■□□□□ 0.22
PTP4A2-214ENST00000532289 PRPS1L1P21108 318 aa16.45■□□□□ 0.22
PTP4A2-214ENST00000532289 CRHR1P34998 444 aa16.45■□□□□ 0.22
PTP4A2-214ENST00000532289 RPS26P62854 115 aaKnown RBP16.45■□□□□ 0.22
PTP4A2-214ENST00000532289 ATAD3BQ5T9A4 648 aa16.45■□□□□ 0.22
PTP4A2-214ENST00000532289 SAMD5Q5TGI4 173 aa16.45■□□□□ 0.22
PTP4A2-214ENST00000532289 C9orf139Q6ZV77 190 aa16.45■□□□□ 0.22
PTP4A2-214ENST00000532289 LSRQ86X29 649 aaPredicted RBP16.45■□□□□ 0.22
PTP4A2-214ENST00000532289 GLB1L3Q8NCI6 653 aaPredicted RBP16.45■□□□□ 0.22
PTP4A2-214ENST00000532289 MZB1Q8WU39 189 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms